{"id":"W2060769471","doi":"10.1074/mcp.m111.009993","title":"The Human Proteome Project: Current State and Future Direction","year":2011,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":356,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia; University of Victoria; McGill University","funders":"","keywords":"Current (fluid); Proteome; State (computer science); Computational biology; Human proteome project; Data science; Computer science; Proteomics; Chemistry; Biology; Bioinformatics; Engineering; Biochemistry; Electrical engineering","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002094251,0.0002766041,0.0001727824,0.00004568366,0.0005984106,0.00009055849,0.0003314864,0.0001120206,0.00002909639],"category_scores_gemma":[0.00001143909,0.0002246581,0.00009495684,0.0001577276,0.0001610694,0.0000879827,0.0001726843,0.0005046854,0.00001014065],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007153853,"about_ca_system_score_gemma":0.00004896636,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004143694,"about_ca_topic_score_gemma":0.00000602046,"domain_scores_codex":[0.9985916,0.00003378431,0.0003393397,0.000469855,0.0001877134,0.0003777189],"domain_scores_gemma":[0.9989233,0.000007894332,0.0002248828,0.0006630711,0.00009149809,0.00008933094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002217592,0.00007264093,0.00009263626,0.00007481465,0.00002206437,0.000007661504,0.0002491369,9.25817e-7,0.970018,0.005217063,0.00003695043,0.02418596],"study_design_scores_gemma":[0.0002033624,0.00003021342,0.00003724532,0.00002457173,0.00002111428,0.00001148381,0.00003725742,0.00009594544,0.9297132,0.02206375,0.0474834,0.0002784822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9239377,0.00177527,0.06645265,0.0001686182,0.00007847175,0.002137336,0.00003256733,0.0002403317,0.005177055],"genre_scores_gemma":[0.814163,0.003231995,0.1690875,0.0000925635,0.0007671289,0.009210862,0.0001748915,0.000330175,0.002941822],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1097747,"threshold_uncertainty_score":0.9161292,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01490619823095905,"score_gpt":0.2578159499142334,"score_spread":0.2429097516832744,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}