{"id":"W2060971625","doi":"10.1093/carcin/bgu207","title":"Integrative post-genome-wide association analysis of CDKN2A and TP53 SNPs and risk of esophageal adenocarcinoma","year":2014,"lang":"en","type":"article","venue":"Carcinogenesis","topic":"Esophageal Cancer Research and Treatment","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research; University of Saskatchewan","funders":"Medical Research Council; National Cancer Institute; National Institutes of Health; Queen's University; University of Texas MD Anderson Cancer Center; Queen's University Belfast; National Institute for Health and Care Research","keywords":"CDKN2A; Single-nucleotide polymorphism; Odds ratio; Hazard ratio; Genetics; Genome-wide association study; Germline mutation; Internal medicine; Biology; Oncology; Gastroenterology; Medicine; Genotype; Cancer; Confidence interval; Gene; Mutation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004731829,0.0001769275,0.0007265245,0.0004674954,0.00006621931,0.00001069711,0.00006434692,0.0000990401,0.00006705767],"category_scores_gemma":[0.0008446047,0.0001372525,0.0002047724,0.0005863749,0.0001216344,0.00005667172,0.00005984993,0.0001161253,0.00000211837],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001770672,"about_ca_system_score_gemma":0.00008717888,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00144943,"about_ca_topic_score_gemma":0.0003857625,"domain_scores_codex":[0.9985038,0.000210668,0.0003270442,0.0003225488,0.0003946548,0.0002412662],"domain_scores_gemma":[0.9981272,0.0006402868,0.0002733869,0.0002827065,0.000454917,0.0002214585],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002549878,0.000089872,0.9913499,0.0001124385,0.002914859,0.00001347272,0.0008585748,0.000007649823,0.001180249,0.00005233048,0.00002568918,0.003139927],"study_design_scores_gemma":[0.001159939,0.0009946999,0.9764915,0.0000204989,0.005077199,0.000002726676,0.0002837357,0.0002857962,0.01553735,0.00004987372,0.00001513702,0.00008153592],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9842469,0.0145412,0.0001013744,0.0002291279,0.00001730442,0.0002870209,0.0002878193,0.00001241304,0.0002768593],"genre_scores_gemma":[0.9979694,0.001262036,0.0003014673,0.00007234159,0.00003793225,0.00002271253,0.0001089948,0.00001584163,0.0002092735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01485844,"threshold_uncertainty_score":0.5596995,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0095313468914964,"score_gpt":0.2594602671523782,"score_spread":0.2499289202608818,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}