{"id":"W2061050444","doi":"10.1159/000320644","title":"<i>Citrobacter rodentium</i> Infection Induces MyD88-Dependent Formation of Ubiquitinated Protein Aggregates in the Intestinal Epithelium","year":2010,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Citrobacter rodentium; Effector; Biology; In vivo; Intestinal epithelium; Citrobacter; Microbiology; Ubiquitin; Immune system; Secretion; Chemistry; Molecular biology; Cell biology; Epithelium; Enterobacteriaceae; Escherichia coli; Pathogen; Immunology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002339757,0.0001660821,0.0002328191,0.0002004506,0.000135511,0.00005863831,0.0004622767,0.0001482297,0.00001464396],"category_scores_gemma":[0.00137888,0.000115314,0.0001226432,0.0002799267,0.0001785856,0.00005874155,0.0002214487,0.0008656787,0.000002139987],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003574053,"about_ca_system_score_gemma":0.0001385266,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000737807,"about_ca_topic_score_gemma":0.0006484987,"domain_scores_codex":[0.9981169,0.0005127213,0.0006242016,0.0001088649,0.000385638,0.0002516822],"domain_scores_gemma":[0.9980514,0.00006046442,0.0007128226,0.000283621,0.0008426401,0.00004905535],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002086068,0.0002574577,0.002126896,0.00005718522,0.00005430888,0.000006861532,0.0003925956,0.00001763205,0.9945396,0.00006572809,0.00006798308,0.002205126],"study_design_scores_gemma":[0.0009022916,0.0008746249,0.1149838,0.0001738158,0.00002453001,0.0001885447,0.0001853043,0.00006553362,0.8794084,0.0002870657,0.002755808,0.0001503413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978696,0.0006089681,0.0001500144,0.0003851345,0.0001632272,0.0002898353,0.000005790197,0.000004786805,0.0005226927],"genre_scores_gemma":[0.998826,0.0005447992,0.0003432159,0.00004117023,0.0001400654,0.00002207248,0.00001261361,0.00001268429,0.00005743125],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1151312,"threshold_uncertainty_score":0.4702367,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01290472536789719,"score_gpt":0.2675901537503432,"score_spread":0.254685428382446,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}