{"id":"W2061118534","doi":"10.1038/hdy.2012.81","title":"The origin and functional transition of P34","year":2012,"lang":"en","type":"article","venue":"Heredity","topic":"Phytase and its Applications","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions; Fundamental Research Funds for the Central Universities; Specialized Research Fund for the Doctoral Program of Higher Education of China; National Key Research and Development Program of China; National Natural Science Foundation of China; McGill University","keywords":"Biology; Gene; Genetics; Transition (genetics); Genome; Synteny; Phylogenetic tree; Gene duplication; Functional divergence; Homologous chromosome; Molecular evolution; Gene family; Phylogenetics; Protein superfamily; Shuffling; Computational biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007795724,0.00001895366,0.00002381584,6.65604e-7,0.0001099172,0.000004509212,0.00001842559,0.00001433915,0.00009307254],"category_scores_gemma":[0.000002438695,0.000005194584,0.00001186962,0.0000421767,0.00003031962,0.00004893101,0.000004561165,0.00002052173,0.000007181255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001901863,"about_ca_system_score_gemma":0.000001048435,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004033619,"about_ca_topic_score_gemma":0.00005871785,"domain_scores_codex":[0.9998241,0.000009789199,0.0000378238,0.00003124249,0.00004253137,0.00005449144],"domain_scores_gemma":[0.9998793,0.00005807852,0.00001336591,0.00001341755,0.00001214755,0.00002371716],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004803827,0.0003087216,0.02442778,0.000008959967,0.00002291358,8.578744e-8,0.0003221773,0.000001195918,0.6957332,0.02646961,0.04967401,0.2029832],"study_design_scores_gemma":[0.00002490827,0.00001718589,0.7972227,0.000001134371,0.000003593881,0.000001461671,0.0001141292,0.000009119657,0.003700167,0.0009429957,0.1979383,0.00002428602],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978995,0.0001846433,0.00000702648,0.0008237679,0.00005780922,0.00003314553,0.00002354585,0.000006615709,0.0009639363],"genre_scores_gemma":[0.9995204,0.00003648148,0.000007152915,0.00003970538,0.0003372621,0.000005012917,0.00001463735,6.18119e-8,0.0000392712],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7727949,"threshold_uncertainty_score":0.1019079,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03911299629943836,"score_gpt":0.2270348735183954,"score_spread":0.187921877218957,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}