{"id":"W2061134976","doi":"10.1080/03079457.2012.711464","title":"Avian hepatitis E virus identified in Russian chicken flocks exhibits high genetic divergence based on the ORF2 capsid gene","year":2012,"lang":"en","type":"article","venue":"Avian Pathology","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Capsid; Virology; Flock; Phylogenetic tree; Genotype; Homology (biology); Gene; Virus; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008129118,0.0003612336,0.0007540759,0.0002120047,0.0002646246,0.00001091837,0.0002746428,0.0003355754,0.001101913],"category_scores_gemma":[0.0006597719,0.000263974,0.0001561176,0.000337347,0.0003363756,0.00006538873,0.0001676999,0.0005539364,0.0009023708],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000161004,"about_ca_system_score_gemma":0.00007414891,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01081971,"about_ca_topic_score_gemma":0.01302467,"domain_scores_codex":[0.9966971,0.0007029281,0.0006846353,0.0005690117,0.0002493473,0.001096993],"domain_scores_gemma":[0.998257,0.0003654232,0.0001837886,0.000851258,0.00005119419,0.0002913151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008394289,0.0002229525,0.9904329,0.00002401533,0.00003428491,0.0006688255,0.0006400784,0.0000407077,0.003664499,0.0008888142,0.001719726,0.00157932],"study_design_scores_gemma":[0.0008851059,0.0003938276,0.9941397,0.00006623485,0.00007183734,0.0001705111,0.00003614663,0.0003574739,0.001838145,0.000348927,0.001422932,0.0002691009],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895962,0.0007700682,0.0005604683,0.004647828,0.00145021,0.0006229933,0.00008794182,0.00006822024,0.00219601],"genre_scores_gemma":[0.9834391,0.002024513,0.001042509,0.01234472,0.0005306726,0.0001794031,0.00006825501,0.00005132779,0.0003195092],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007696887,"threshold_uncertainty_score":0.9999812,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02855432720960873,"score_gpt":0.2716034429325977,"score_spread":0.243049115722989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}