{"id":"W2061272685","doi":"10.1007/s00705-013-1666-y","title":"Genome sequence of a chimpanzee herpesvirus and its relation to other primate alphaherpesviruses","year":2013,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"National Center for Research Resources; National Institute of General Medical Sciences; Health Canada; National Institutes of Health; Public Health Agency","keywords":"Biology; Phylogenetic tree; Sequence (biology); Genome; Phylogenetics; Whole genome sequencing; Primate; Herpes simplex virus; Virology; Genetics; Virus; Strain (injury); Evolutionary biology; Gene; Neuroscience","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005506153,0.0001284471,0.0003341324,0.0001930768,0.00003917871,0.000003567162,0.00006032641,0.00006723362,0.0002781404],"category_scores_gemma":[0.00004781776,0.0001061425,0.00005818571,0.0001052585,0.0001471116,0.000070781,0.00005665941,0.00009057487,0.0001031891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001161819,"about_ca_system_score_gemma":0.00003454565,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004078933,"about_ca_topic_score_gemma":0.00002067253,"domain_scores_codex":[0.9991488,0.00006108843,0.000294517,0.0002160054,0.00008133602,0.0001982944],"domain_scores_gemma":[0.9993942,0.0001216267,0.0001163574,0.0002178891,0.00002877297,0.0001211216],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002804252,0.0003597636,0.03974608,0.0001065703,0.0002878617,0.000006793562,0.001332873,0.00003807236,0.8971806,0.001759151,0.00001292429,0.05888887],"study_design_scores_gemma":[0.001755233,0.001420134,0.9456012,0.00008163985,0.0001351627,0.00007003678,0.00004125648,0.000429158,0.03249266,0.002846242,0.01496349,0.000163795],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925408,0.0004036788,0.00026138,0.0002991365,0.0000363622,0.0005464835,0.00003891703,0.00002589487,0.005847385],"genre_scores_gemma":[0.9966358,0.0001262516,0.002478318,0.0003934308,0.00002283977,0.00005321112,0.000007306436,0.00001970524,0.0002631428],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9058551,"threshold_uncertainty_score":0.4328365,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02571520359332359,"score_gpt":0.3019902511353938,"score_spread":0.2762750475420702,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}