{"id":"W2061284677","doi":"10.2174/1875036201004010041","title":"Differences in Promoters of Orthologous Genes","year":2010,"lang":"en","type":"article","venue":"The Open Bioinformatics Journal","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute","funders":"Directorate for Biological Sciences; University of Ottawa","keywords":"Gene; Biology; Zebrafish; Orthologous Gene; Genome; Genetics; Promoter; Human genome; Phylogenetic tree; Model organism; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006639238,0.000190191,0.0003467478,0.0009775921,0.0001531105,0.0002934176,0.0002147632,0.0002358235,0.001401705],"category_scores_gemma":[0.001874155,0.0001862824,0.0004515174,0.0005056643,0.0003219653,0.0002789209,0.0004036807,0.0003839314,0.0004232702],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001673736,"about_ca_system_score_gemma":0.0002429559,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003820272,"about_ca_topic_score_gemma":0.0004871798,"domain_scores_codex":[0.9992812,0.0001237473,0.0000522034,0.0003105986,0.0001584465,0.00007379601],"domain_scores_gemma":[0.998853,0.0004933571,0.0002399563,0.0001103821,0.0001780213,0.0001253299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003942139,0.00004124214,0.04728856,0.0002035428,0.00008832591,0.0002659918,0.0003660132,0.0006546857,0.9373721,0.0008345914,0.00009213664,0.0123985],"study_design_scores_gemma":[0.00005025446,0.0008304866,0.6868834,0.00005648311,0.0002512833,0.003437105,0.0005448517,0.007552482,0.2886774,0.003281622,0.00838851,0.00004610017],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9878634,0.0007680954,0.009413604,0.00003633477,0.00001481513,0.00001677084,0.0006502043,0.0000945156,0.001142125],"genre_scores_gemma":[0.9899904,0.0002186283,0.006921693,0.00004991065,0.00001075274,0.00003166913,0.002159972,0.0000319847,0.0005849776],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001401705,"threshold_uncertainty_score":0.004689157,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02240162046769039,"score_gpt":0.2833074828353821,"score_spread":0.2609058623676917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}