{"id":"W2061729961","doi":"10.1093/nar/gkm455","title":"Widely variable endogenous retroviral methylation levels in human placenta","year":2007,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Terry Fox Research Institute","funders":"BC Cancer Agency; Canadian Institutes of Health Research","keywords":"Biology; Methylation; Endogenous retrovirus; DNA methylation; Long terminal repeat; Placenta; Promoter; Retrotransposon; Genetics; Gene; Molecular biology; Transposable element; Genome; Gene expression; Fetus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002766766,0.0001044794,0.000172645,0.0005016434,0.0001089696,0.0003575474,0.0001417027,0.0001514112,0.001393786],"category_scores_gemma":[0.0008855062,0.0001378614,0.00009604891,0.0003358817,0.0002099047,0.000114398,0.0002110645,0.0001901577,0.0002566898],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002394399,"about_ca_system_score_gemma":0.000101654,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001104792,"about_ca_topic_score_gemma":0.0007536734,"domain_scores_codex":[0.9997744,0.00005164312,0.00001492793,0.00007215037,0.00005759564,0.00002940691],"domain_scores_gemma":[0.9997531,0.00006801655,0.00006813965,0.00003715133,0.00005084415,0.00002275529],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006748067,0.00001530794,0.05521424,0.0001134675,0.00008427578,0.0002884576,0.0006604465,0.0002347493,0.9256874,0.0004131684,0.00008313625,0.01653047],"study_design_scores_gemma":[0.00003547181,0.0005922737,0.460667,0.00006078176,0.000206729,0.004687255,0.0007376506,0.001689934,0.5230929,0.001383369,0.006817201,0.00002948462],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913927,0.003538314,0.003088704,0.00003491271,0.00000495796,0.000008549643,0.0004566431,0.00005857003,0.001416584],"genre_scores_gemma":[0.9970695,0.0008385947,0.001040747,0.00001761534,0.000003106553,0.00000913173,0.0004002093,0.00001449866,0.0006066449],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001393786,"threshold_uncertainty_score":0.004662693,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.129640460043643,"score_gpt":0.3391824188904717,"score_spread":0.2095419588468288,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}