{"id":"W2061944620","doi":"10.1186/1471-2164-9-412","title":"The protein-phosphatome of the human malaria parasite Plasmodium falciparum","year":2008,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institutes of Health; National Institute of Technology Delhi; Institut National de la Santé et de la Recherche Médicale; National Institute of Allergy and Infectious Diseases; European Commission; Duke-NUS Medical School; Wellcome Trust; McGill University; Burroughs Wellcome Fund","keywords":"Biology; Plasmodium falciparum; Phylogenetic tree; Genome; Phylum; Genetics; Context (archaeology); Malaria; Phylogenetics; Apicomplexa; Clade; Subfamily; Plasmodium (life cycle); Gene; Evolutionary biology; Computational biology; Parasite hosting; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001126893,0.0003827196,0.0002354077,0.0005378746,0.0003325295,0.0003194529,0.0001333872,0.0002366335,0.001528942],"category_scores_gemma":[0.0003485712,0.000090548,0.0001854502,0.0006498719,0.0001640194,0.0002770421,0.0002366811,0.0002664055,0.0006567329],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001961617,"about_ca_system_score_gemma":0.0003022221,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001028972,"about_ca_topic_score_gemma":0.0009431567,"domain_scores_codex":[0.9999154,0.0000112964,0.000005551305,0.00003115701,0.00002493069,0.00001167927],"domain_scores_gemma":[0.9998852,0.000028635,0.00004422334,0.000007797401,0.00001703039,0.00001704487],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001648158,0.00009019228,0.07196153,0.002568033,0.0001365546,0.00112067,0.0003992535,0.003653353,0.8130659,0.001780614,0.003672587,0.09990305],"study_design_scores_gemma":[0.00008649241,0.001278658,0.6034979,0.0002264901,0.0003434197,0.01323829,0.0006314727,0.01726677,0.2477304,0.003835269,0.1118082,0.000056746],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9592053,0.009934844,0.01134269,0.0003143466,0.00002981641,0.00007467547,0.01512331,0.0002951203,0.003679928],"genre_scores_gemma":[0.9602375,0.003517788,0.01364024,0.00008081229,0.00002753803,0.0000445922,0.02086007,0.00003822023,0.001553088],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001528942,"threshold_uncertainty_score":0.005114853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01764063132623202,"score_gpt":0.2431602439362651,"score_spread":0.2255196126100331,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}