{"id":"W2062592181","doi":"10.1074/jbc.m112.436683","title":"The Evolutionary Rewiring of the Ribosomal Protein Transcription Pathway Modifies the Interaction of Transcription Factor Heteromer Ifh1-Fhl1 (Interacts with Forkhead 1-Forkhead-like 1) with the DNA-binding Specificity Element","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Concordia University","funders":"Canadian Institutes of Health Research","keywords":"Regulon; Biology; Forkhead Transcription Factors; Transcription factor; Ribosomal protein; Rap1; Transcription preinitiation complex; DNA-binding domain; Genetics; Promoter; Cell biology; Gene; Ribosome; RNA; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001011133,0.0002387267,0.00009646866,0.0002081777,0.0001808807,0.0002429913,0.0002347114,0.0002967626,0.000874139],"category_scores_gemma":[0.00009303878,0.0001093423,0.0001814562,0.00009814637,0.0002623544,0.0001909928,0.0003336949,0.0004425143,0.0002657135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002693523,"about_ca_system_score_gemma":0.0001160438,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003641479,"about_ca_topic_score_gemma":0.0007112731,"domain_scores_codex":[0.9999133,0.0000101963,0.000003428707,0.00003059099,0.0000160343,0.00002637576],"domain_scores_gemma":[0.9999485,0.000004676356,0.00001820569,0.000009238838,0.000005363254,0.00001395099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006252322,0.00001380086,0.001084264,0.00001580586,0.000008837909,0.0001545524,0.00003462222,0.00006332288,0.9947715,0.0002936608,0.00003190065,0.003465213],"study_design_scores_gemma":[0.00004924684,0.000529637,0.207677,0.00002861736,0.0001406328,0.004654645,0.0003542754,0.00379995,0.7576419,0.0008067396,0.02428152,0.00003582319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960906,0.0005549164,0.001492509,0.00008813634,0.00001857537,0.000005911495,0.00007436051,0.00003472742,0.001640288],"genre_scores_gemma":[0.9961893,0.0004106489,0.000894181,0.00008686322,0.00001329859,0.000006155194,0.0002344439,0.00001486872,0.002150258],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000874139,"threshold_uncertainty_score":0.002924263,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02792324654507617,"score_gpt":0.2439489648689836,"score_spread":0.2160257183239074,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}