{"id":"W2062613095","doi":"10.1016/j.funbio.2012.06.003","title":"In vivo conformation and replication intermediates of circular mitochondrial plasmids in Neurospora and Cryphonectria parasitica","year":2012,"lang":"en","type":"article","venue":"Fungal Biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Michigan Agriculture Experiment Station; U.S. Department of Agriculture","keywords":"Biology; Neurospora crassa; Plasmid; Rolling circle replication; Neurospora; Mitochondrial DNA; Origin of replication; DNA replication; DNA; Crassa; Genetics; Molecular biology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009917731,0.0000528473,0.0001104561,0.00001738649,0.0000151166,0.000003806343,0.00003841659,0.00007524222,0.00002052133],"category_scores_gemma":[0.00006787661,0.0000249379,0.00001139883,0.0000803217,0.00005655117,0.00007503693,0.00001761212,0.00004215219,0.000001570682],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005267118,"about_ca_system_score_gemma":0.000003181869,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006216703,"about_ca_topic_score_gemma":0.0001327514,"domain_scores_codex":[0.9995133,0.00004973981,0.0001565921,0.0001136059,0.00002881338,0.0001379761],"domain_scores_gemma":[0.9997463,0.0001221563,0.00004828357,0.00003042984,0.000009962551,0.00004287001],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005789641,0.00002197642,0.365583,0.000007240295,0.000001379226,6.154592e-7,0.00005518012,1.975754e-7,0.6325536,0.0002657941,0.00004049738,0.001412598],"study_design_scores_gemma":[0.0002034001,0.0001011939,0.9711908,0.000009676315,0.000003690884,0.000008326946,0.00005911527,0.00006023871,0.02620246,0.0004875339,0.00160909,0.00006453579],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988353,0.0006573827,0.000001023781,0.0001732552,0.00008539818,0.0001066399,0.00007536478,0.000004319096,0.00006134637],"genre_scores_gemma":[0.9994637,0.0003120123,0.00001814194,0.00008294788,0.00006780323,0.000007699419,0.00004381296,2.632162e-7,0.000003639393],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6063512,"threshold_uncertainty_score":0.1016938,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01017880472574955,"score_gpt":0.2328488107406919,"score_spread":0.2226700060149423,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}