{"id":"W2062673928","doi":"10.1128/jb.06211-11","title":"E622, a Miniature, Virulence-Associated Mobile Element","year":2011,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Western University; University of Regina","funders":"Canada Research Chairs","keywords":"Biology; Inverted repeat; Transposable element; Genetics; Virulence; Mobile genetic elements; Gene; Pseudomonas syringae; Genome; Operon; Horizontal gene transfer; Direct repeat; Microbiology; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005512149,0.0004073919,0.0001749851,0.0002890382,0.0001743687,0.0002445187,0.0001284049,0.0003454821,0.0007861389],"category_scores_gemma":[0.0001955391,0.00006150861,0.0001844763,0.0001600952,0.0001524065,0.0002031192,0.0002284215,0.0003153536,0.0005242072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007696058,"about_ca_system_score_gemma":0.0001203456,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002927769,"about_ca_topic_score_gemma":0.0003613235,"domain_scores_codex":[0.9999428,0.000005286539,0.000003460608,0.00001452434,0.00001973809,0.00001412969],"domain_scores_gemma":[0.9999191,0.00001568654,0.00002311743,0.000008549068,0.000009523396,0.00002406658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001246406,0.00006239092,0.003946421,0.00003855729,0.000006539008,0.0003739693,0.00003190426,0.00008494929,0.9893389,0.0001586923,0.00007500574,0.00575803],"study_design_scores_gemma":[0.0000641509,0.001392809,0.09294275,0.00002922374,0.00003830078,0.01247731,0.0004355973,0.002782657,0.8686541,0.0005019314,0.02064171,0.00003928481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930118,0.0007117118,0.004119847,0.00007563589,0.00002492162,0.0000494651,0.0005962691,0.00005562614,0.001354679],"genre_scores_gemma":[0.9871912,0.0004052728,0.006146734,0.00007314119,0.00001244971,0.00002493326,0.002865339,0.00001645161,0.003264439],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007861389,"threshold_uncertainty_score":0.002629876,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03030038283233666,"score_gpt":0.2162455343597225,"score_spread":0.1859451515273859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}