{"id":"W2062720267","doi":"10.3168/jds.2011-5164","title":"Epidemiology of coagulase-negative staphylococci intramammary infection in dairy cattle and the effect of bacteriological culture misclassification","year":2012,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Milk Quality and Mastitis in Dairy Cows","field":"Agricultural and Biological Sciences","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island; University of Guelph; University of Calgary; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Novalait; Université de Montréal; Public Health Agency; Dairy Farmers of Ontario; Agriculture and Agri-Food Canada; Dairy Farmers of Nova Scotia; Public Health Agency of Canada; Dairy Farmers of Canada","keywords":"Incidence (geometry); Medicine; Herd; Confidence interval; Epidemiology; Poisson regression; Credible interval; Coagulase; Mastitis; Veterinary medicine; Prevalence; Cohort study; Staphylococcus; Internal medicine; Biology; Environmental health; Staphylococcus aureus; Population; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01050259,0.000353828,0.0004583835,0.001148709,0.0004744943,0.00110913,0.00113584,0.0005374185,0.0003033312],"category_scores_gemma":[0.02433395,0.0004478214,0.0004465841,0.00127969,0.0008803869,0.0006345853,0.0006593551,0.0006301822,0.00004843572],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002360322,"about_ca_system_score_gemma":0.002343778,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1837406,"about_ca_topic_score_gemma":0.1685518,"domain_scores_codex":[0.9922308,0.003557164,0.0006110115,0.001096097,0.001877356,0.0006274533],"domain_scores_gemma":[0.9800061,0.006666011,0.009366205,0.00160221,0.001716815,0.0006427026],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006372506,0.000007503502,0.997141,0.00001066343,0.00005064007,0.00001746318,0.0001537935,0.0001978918,0.0001059825,0.00002990957,0.00001749213,0.002203965],"study_design_scores_gemma":[0.000001363037,0.00005159026,0.9986443,0.00001096334,0.00001805332,0.00007141734,0.0001132741,0.0009513469,0.00005282124,0.00003469888,0.00004677021,0.000003283725],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982601,0.0006266782,0.00080356,0.00005479389,0.000003958709,0.000009457325,0.00008869939,0.000006193772,0.0001465572],"genre_scores_gemma":[0.9991357,0.0001802058,0.0004716608,0.00002448935,0.000004808357,0.000004382784,0.0001230963,0.000001778108,0.00005389746],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1837406,"threshold_uncertainty_score":0.3653423,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03214374518782878,"score_gpt":0.2887217768153814,"score_spread":0.2565780316275527,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}