{"id":"W2062739222","doi":"10.1111/j.1574-695x.2006.00191.x","title":"Molecular methods used in clinical laboratory: prospects and pitfalls","year":2007,"lang":"en","type":"review","venue":"FEMS Immunology & Medical Microbiology","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"Centers for Disease Control and Prevention","keywords":"Borrelia burgdorferi; Biology; Molecular diagnostics; Borrelia; Treponema; Pathogen; Lyme disease; Identification (biology); Clinical microbiology; Syphilis; Molecular epidemiology; Diagnostic test; Virology; Computational biology; Microbiology; Immunology; Bioinformatics; Medicine; Genetics; Human immunodeficiency virus (HIV); Ecology; Veterinary medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003868518,0.0006238592,0.004262709,0.0007100492,0.00006457259,0.00001085041,0.0003248423,0.004486253,0.0003868723],"category_scores_gemma":[0.002572643,0.0004651424,0.0005365949,0.0008186253,0.001798491,0.00002920787,0.0003500886,0.003796976,0.00015631],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001967732,"about_ca_system_score_gemma":0.001186388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007267186,"about_ca_topic_score_gemma":0.00004946855,"domain_scores_codex":[0.9938813,0.00223891,0.001925476,0.001025426,0.00009463727,0.0008341883],"domain_scores_gemma":[0.9972702,0.001194298,0.0004445117,0.000672601,0.0001018593,0.0003165479],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00006122082,0.0005279418,0.001059,0.001835311,0.001101407,0.001185186,0.00003056906,9.296034e-9,0.001760835,0.0006101879,0.0004721192,0.9913562],"study_design_scores_gemma":[0.001663308,0.001008395,0.0004899598,0.003634635,0.0005763415,0.002713504,0.00001137646,9.195696e-7,0.0000745854,0.0000321105,0.9894087,0.0003861707],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.009226613,0.9868402,0.0003393494,0.0002830062,0.001858549,0.001140423,0.00002949904,0.0001050538,0.0001772972],"genre_scores_gemma":[0.0001868152,0.9964793,0.00155088,0.0009536798,0.0002957132,0.00009282676,0.0002464484,0.00008411353,0.0001101974],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.99097,"threshold_uncertainty_score":0.99978,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06436305340644181,"score_gpt":0.4677591520092946,"score_spread":0.4033960986028528,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}