{"id":"W2063019204","doi":"10.1016/j.jmb.2010.12.020","title":"Crystal Structure of Escherichia coli BamB, a Lipoprotein Component of the β-Barrel Assembly Machinery Complex","year":2010,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Research Council Canada; Canada Foundation for Innovation; Michael Smith Health Research BC; University of Saskatchewan; Canadian Light Source","keywords":"Bama; Biology; Bacterial outer membrane; Binding site; Protein structure; Peptide sequence; Escherichia coli; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002266767,0.0001978462,0.0004248282,0.00008336782,0.00004086437,0.000007498262,0.0006786265,0.0005659179,0.00003574969],"category_scores_gemma":[0.0001592184,0.0001328877,0.0002978655,0.0001342605,0.000431325,0.000002140408,0.0002965517,0.0004648152,3.138118e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006705176,"about_ca_system_score_gemma":0.0001648548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004087461,"about_ca_topic_score_gemma":0.00006940734,"domain_scores_codex":[0.9986036,0.0001796944,0.0006421585,0.0002003205,0.0001467303,0.0002274307],"domain_scores_gemma":[0.9982776,0.00001325301,0.0008656596,0.0004742477,0.0002971516,0.00007209583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001944625,0.00009872297,0.0009785244,0.00002140516,0.0001626456,0.00000357182,0.00001057186,0.00002802113,0.9968508,0.0006291647,0.0001228377,0.0008992385],"study_design_scores_gemma":[0.0007607301,0.0008940491,0.01127949,0.00001428813,0.00004871572,0.0001475483,0.00001360693,0.00002361262,0.9791383,0.0005508589,0.006994097,0.0001346751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9968407,0.0003699576,0.001250932,0.0005187868,0.0006941267,0.0001733727,0.00008455625,0.000002568171,0.00006497589],"genre_scores_gemma":[0.9937628,0.00004704177,0.005745966,0.0001861375,0.0002008372,0.000001139499,0.00002513993,0.00002046214,0.00001045645],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01771251,"threshold_uncertainty_score":0.5419003,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006008027607763994,"score_gpt":0.235505395397381,"score_spread":0.229497367789617,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}