{"id":"W2063101358","doi":"10.1046/j.1365-2958.2002.02996.x","title":"LitR, a new transcriptional activator in <i>Vibrio fischeri</i>, regulates luminescence and symbiotic light organ colonization","year":2002,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":135,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"National Center for Research Resources; National Institutes of Health; National Science Foundation","keywords":"Biology; Microbiology; Vibrio; Quorum sensing; Vibrio cholerae; Bioluminescence; Mutant; Vibrio harveyi; Gene; Genetics; Bacteria; Virulence; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009463596,0.0002161462,0.0002298226,0.00008482435,0.00006639268,0.00003108929,0.0001742353,0.0002437339,0.00008089092],"category_scores_gemma":[0.0001383692,0.0002159615,0.00005488013,0.0001911252,0.000168368,0.00000899569,0.0001372037,0.000128937,0.0000168809],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003330511,"about_ca_system_score_gemma":0.00005145248,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002570348,"about_ca_topic_score_gemma":0.00005417382,"domain_scores_codex":[0.9986446,0.0001365321,0.0002281232,0.0005137472,0.0000528952,0.0004240558],"domain_scores_gemma":[0.9995202,0.00001171257,0.00005607643,0.0002455589,0.00005968123,0.0001067393],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000617472,0.00006379624,0.00277295,0.00002269959,0.00005431866,0.00001925656,0.0001295903,0.00000494897,0.9947093,0.00005800223,0.001852944,0.000250425],"study_design_scores_gemma":[0.001066066,0.0002726864,0.005036145,0.00002938778,0.00001337522,0.0001160941,0.00002362204,0.00002633404,0.9544237,0.00002776512,0.03869945,0.0002653575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992395,0.004416593,0.0004507564,0.002181702,0.00009605839,0.0002774384,0.00001969235,0.00001697218,0.0001457199],"genre_scores_gemma":[0.9971192,0.0005103025,0.0007763265,0.000453564,0.00008886096,0.00001482398,0.0001531189,0.000029533,0.000854193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04028561,"threshold_uncertainty_score":0.8806656,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007589336483224265,"score_gpt":0.2055662554486144,"score_spread":0.1979769189653901,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}