{"id":"W2063265405","doi":"10.1016/j.diagmicrobio.2010.11.011","title":"Characteristics of infections caused by extended-spectrum β-lactamase–producing Escherichia coli from community hospitals in South Africa","year":2011,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Escherichia coli; Microbiology; Multilocus sequence typing; Biology; Ciprofloxacin; Plasmid; Phylogenetic tree; Pulsed-field gel electrophoresis; clone (Java method); Typing; Antibiotics; Genotype; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001929037,0.0002448236,0.0003292944,0.00007022707,0.0001528007,0.00001467036,0.0001539281,0.0002187904,0.00008889546],"category_scores_gemma":[0.001201825,0.0002510941,0.00007356743,0.0001177022,0.0004156347,0.00001084459,0.000147013,0.0002589037,0.000007217082],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002312185,"about_ca_system_score_gemma":0.00008535621,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002856703,"about_ca_topic_score_gemma":0.0001497641,"domain_scores_codex":[0.9985446,0.0003424359,0.0003857147,0.0003869189,0.00003016979,0.0003101959],"domain_scores_gemma":[0.9988899,0.0001984579,0.0002254706,0.000487213,0.00005719097,0.0001418105],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001017596,0.0006630793,0.780649,0.00004119992,0.00008025628,0.000008122502,0.0008113534,6.885127e-7,0.2172488,0.00004350721,0.0003037392,0.00004845782],"study_design_scores_gemma":[0.0006773444,0.0004187236,0.9690918,0.00006116881,0.00008831477,0.000001945397,0.0001283187,0.000001842066,0.02852958,0.0002921758,0.000420842,0.0002879023],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970425,0.0008446931,0.000267753,0.00001552273,0.0002159227,0.0003096559,0.001025984,0.00002388195,0.0002540869],"genre_scores_gemma":[0.9984999,0.0004556856,0.0000335876,0.000114396,0.00004893605,0.0000277141,0.0007654997,0.00002564481,0.00002866942],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1887193,"threshold_uncertainty_score":0.9999942,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007362472114177156,"score_gpt":0.2073906154834453,"score_spread":0.2000281433692682,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}