{"id":"W2063561549","doi":"10.1021/pr900103y","title":"<i>Streptococcus pneumoniae</i>and<i>Staphylococcus aureus</i>Pneumonia Induce Distinct Metabolic Responses","year":2009,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Streptococcus pneumoniae; Staphylococcus aureus; Microbiology; Pneumonia; Biology; Medicine; Bacteria; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.003672056,0.0002978121,0.0007819907,0.001376596,0.0004885442,0.000147425,0.0003475219,0.0002483536,0.000091946],"category_scores_gemma":[0.001755454,0.0002144305,0.0003108557,0.001119846,0.0003778593,0.000329824,0.0001092781,0.002427758,0.00006946138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000154054,"about_ca_system_score_gemma":0.001005653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001182651,"about_ca_topic_score_gemma":0.0000046204,"domain_scores_codex":[0.9955753,0.000743243,0.0009238358,0.0003708985,0.0015622,0.0008245161],"domain_scores_gemma":[0.9965496,0.0003956071,0.0003599307,0.0005316616,0.00135248,0.0008106973],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003844752,0.0004865083,0.03923037,0.00007047468,0.0001218114,0.0007891772,0.0002541772,0.000001901042,0.9488023,0.0002043557,0.0007898209,0.008864647],"study_design_scores_gemma":[0.002520571,0.005308725,0.8091902,0.0004345596,0.0001531056,0.001591158,0.0002279037,0.00001954236,0.05813082,0.00156443,0.1205319,0.0003271425],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9793502,0.001820538,0.00004796169,0.01584562,0.0001650155,0.001138826,0.00001228383,0.00004775649,0.001571791],"genre_scores_gemma":[0.9969202,0.0005608525,0.0001884321,0.000401435,0.0008716902,0.0000513371,0.000001272652,0.00003585789,0.0009689735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8906715,"threshold_uncertainty_score":0.9998737,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06372937391900164,"score_gpt":0.3917594254076889,"score_spread":0.3280300514886873,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}