{"id":"W2063639137","doi":"10.1371/journal.ppat.1000178","title":"The Core and Accessory Genomes of Burkholderia pseudomallei: Implications for Human Melioidosis","year":2008,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Health Sciences Centre; South Health Campus","funders":"Wellcome Trust","keywords":"Burkholderia pseudomallei; Melioidosis; Biology; Genome; Gene; Virulence; Genetics; Comparative genomics; Burkholderia; Bacterial genome size; Metagenomics; Microbiology; Genomics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001167376,0.000208809,0.0001407043,0.0003058953,0.0001427864,0.0002197528,0.00009112908,0.0001277174,0.000783335],"category_scores_gemma":[0.0004183223,0.00008110326,0.00008887186,0.0002898882,0.000168818,0.0001792705,0.0002230322,0.0001624989,0.0001022569],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001199121,"about_ca_system_score_gemma":0.00009558548,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001040622,"about_ca_topic_score_gemma":0.001296748,"domain_scores_codex":[0.9999263,0.00001525077,0.000005256905,0.00002257928,0.0000123349,0.00001827176],"domain_scores_gemma":[0.9998325,0.0000417509,0.00005213231,0.00002122028,0.00001614921,0.00003626931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001230873,0.0000466932,0.1002435,0.0001350492,0.00003237815,0.0002392282,0.0003276511,0.0003871357,0.8822415,0.0002337307,0.00009731809,0.01478483],"study_design_scores_gemma":[0.00003368188,0.0004968613,0.885989,0.00004120537,0.00009439454,0.004419332,0.0008151917,0.001812445,0.1011532,0.0008019218,0.00432567,0.00001710033],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985933,0.0004684212,0.0004105218,0.00004456229,0.000001385658,0.000003001222,0.0003211304,0.000005991609,0.0001516837],"genre_scores_gemma":[0.9986274,0.0002633573,0.0004828463,0.00001630133,0.000003217548,0.000004305768,0.0004911256,0.00000264235,0.0001088312],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001040622,"threshold_uncertainty_score":0.002620459,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1195531617120439,"score_gpt":0.3217384685289247,"score_spread":0.2021853068168808,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}