{"id":"W2064619882","doi":"10.1007/s00705-005-0707-6","title":"Whole genome characterization of Potato virus Y isolates collected in the western USA and their comparison to isolates from Europe and Canada","year":2006,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":137,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"U.S. Department of Agriculture","keywords":"Potato virus Y; Biology; Virology; Potyvirus; GenBank; Serotype; Genome; Whole genome sequencing; Virus; Genetics; Gene; Plant virus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001453336,0.0002721362,0.0002347107,0.001318896,0.0008796749,0.0004516844,0.0001923347,0.0002117252,0.0006561909],"category_scores_gemma":[0.0003696233,0.0001308782,0.0002369552,0.001905524,0.0001908556,0.0000969852,0.0003075996,0.0003151883,0.0002395461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001049369,"about_ca_system_score_gemma":0.002073879,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.4773419,"about_ca_topic_score_gemma":0.6572031,"domain_scores_codex":[0.9998322,0.000009903444,0.000008884004,0.00003403963,0.00004124468,0.00007369136],"domain_scores_gemma":[0.9996544,0.00003084217,0.00005071521,0.00001186547,0.0001780276,0.00007407294],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001127878,0.0001159999,0.220548,0.0001303739,0.000154674,0.0007902316,0.00304079,0.0002491412,0.7564771,0.0001289063,0.001108671,0.01612824],"study_design_scores_gemma":[0.000007679827,0.00006812141,0.9878051,0.00001325576,0.00004098129,0.0003732111,0.001238456,0.00009319388,0.006249011,0.000008232018,0.004096705,0.000006003394],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942503,0.00038946,0.0002880785,0.00004486619,0.000007204577,0.00003025711,0.003432537,0.00000708372,0.001550122],"genre_scores_gemma":[0.978433,0.0007867385,0.001194652,0.0001421899,0.000006748572,0.00003153139,0.01653519,0.0000140987,0.002855831],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5226581,"threshold_uncertainty_score":0.9491268,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01348934203472082,"score_gpt":0.2115941384265513,"score_spread":0.1981047963918305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}