{"id":"W2064712921","doi":"10.1093/nar/gkq939","title":"CPLA 1.0: an integrated database of protein lysine acetylation","year":2010,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Key Research and Development Program of China; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Acetylation; Lysine; Histone; Biology; Histone Acetyltransferases; Biochemistry; Bromodomain; P300-CBP Transcription Factors; Database; Computational biology; Amino acid; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00200067,0.002422706,0.003107356,0.009158101,0.0009092699,0.003292743,0.004014375,0.001311162,0.01062236],"category_scores_gemma":[0.006644624,0.001294668,0.001386385,0.01278856,0.0004266076,0.003241323,0.003210683,0.001982069,0.01641924],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009911526,"about_ca_system_score_gemma":0.003140802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002847696,"about_ca_topic_score_gemma":0.003113596,"domain_scores_codex":[0.9985322,0.0001926853,0.0003374303,0.0004717818,0.0003358618,0.0001300121],"domain_scores_gemma":[0.9966491,0.0007937949,0.0007350103,0.0008331098,0.0005600053,0.0004291247],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.005062302,0.0004817375,0.02608501,0.01397461,0.001484182,0.002221006,0.0008702803,0.01081863,0.08087101,0.01805409,0.509466,0.3306113],"study_design_scores_gemma":[0.0006006338,0.000423729,0.03866991,0.0005489923,0.0007471266,0.002417804,0.0002230288,0.02422407,0.03384148,0.01873041,0.8791941,0.0003787077],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.01608867,0.003790719,0.06428535,0.00022667,0.0001210287,0.0004405178,0.8370151,0.07083025,0.00720164],"genre_scores_gemma":[0.01675029,0.001490199,0.05697557,0.0001513901,0.00004368625,0.0007585042,0.9205406,0.002068022,0.001221767],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.01062236,"threshold_uncertainty_score":0.03553534,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03221501557103177,"score_gpt":0.3580756470991908,"score_spread":0.325860631528159,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}