{"id":"W2064912298","doi":"10.1128/jb.06565-11","title":"Oligomerization of the Response Regulator ComE from Streptococcus mutans Is Affected by Phosphorylation","year":2011,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of Dental and Craniofacial Research; University of Illinois at Chicago; National Institutes of Health","keywords":"Phosphorylation; Biology; Response regulator; Regulator; Footprinting; Streptococcus mutans; Function (biology); DNA footprinting; DNA; Cell biology; Plasma protein binding; DNA-binding protein; Biochemistry; Genetics; Bacteria; Bacterial protein; Transcription factor; Gene; Base sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001319598,0.0002660917,0.0002974909,0.0001961333,0.000164891,0.0003296652,0.0001255073,0.0002574449,0.001020397],"category_scores_gemma":[0.0002745714,0.0001594015,0.0002988187,0.0001085331,0.0002699654,0.0002309414,0.0002255316,0.0004317506,0.0002927922],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000202873,"about_ca_system_score_gemma":0.0001069681,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003470143,"about_ca_topic_score_gemma":0.0003145528,"domain_scores_codex":[0.9998308,0.00003177326,0.00001355185,0.000031959,0.00005473408,0.00003707451],"domain_scores_gemma":[0.9997472,0.00006418928,0.00009099962,0.00002088895,0.00002119376,0.00005541827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006551688,0.00001950066,0.0003583747,0.00001267046,0.000003192647,0.00004800761,0.00001985421,0.00003011459,0.9991944,0.00003599862,0.000009979956,0.000202389],"study_design_scores_gemma":[0.00001156815,0.0001920334,0.0260675,0.000008219978,0.00001380742,0.0004260269,0.0000839132,0.00104306,0.9711609,0.0001005704,0.0008798109,0.00001265794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986973,0.0002811636,0.0004912367,0.00004442334,0.000007847088,0.000005268335,0.00004881839,0.00002016247,0.0004037906],"genre_scores_gemma":[0.9987574,0.0001278751,0.0003556191,0.00003284769,0.000004316147,0.000006874561,0.0001909927,0.00001092319,0.0005133039],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001020397,"threshold_uncertainty_score":0.003413558,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007992290167978722,"score_gpt":0.2110937105290937,"score_spread":0.203101420361115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}