{"id":"W2065030776","doi":"10.3791/2774","title":"&lt;em&gt;Trichuris muris&lt;/em&gt; Infection: A Model of Type 2 Immunity and Inflammation in the Gut","year":2011,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Canadian Association of Gastroenterology","keywords":"Trichuris; Biology; Trichuriasis; Immune system; Immunology; Intestinal epithelium; Immunity; Inflammation; Intestinal mucosa; Proinflammatory cytokine; Pathogen; Microbiology; Helminths; Epithelium; Medicine; Internal medicine; Ascariasis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004842519,0.0001338708,0.000300774,0.0002660496,0.0001211318,0.00001859528,0.0001708963,0.0001503875,0.0003484061],"category_scores_gemma":[0.000102075,0.00009715887,0.0001016767,0.0001889704,0.00006826397,0.000293278,0.00005246082,0.0002584983,0.00003056389],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004631323,"about_ca_system_score_gemma":0.00005455838,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001132369,"about_ca_topic_score_gemma":0.00002695934,"domain_scores_codex":[0.998748,0.0003088134,0.0006083924,0.0000938848,0.00007907101,0.0001618421],"domain_scores_gemma":[0.9989731,0.00008257252,0.0005329935,0.0001729701,0.0002158792,0.000022463],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009487018,0.0006054949,0.004337884,0.0000115494,0.0002254738,0.000005363328,0.02121568,0.00002893226,0.9700589,0.000608744,0.0009924194,0.0009608938],"study_design_scores_gemma":[0.0102506,0.002723033,0.146112,0.0003222413,0.0003233648,0.0007931699,0.004931761,0.0008505768,0.8175428,0.00167948,0.01392943,0.0005415216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953477,0.002207102,0.0003212246,0.00002494233,0.0004168632,0.000136671,0.000004519775,0.000007339145,0.001533652],"genre_scores_gemma":[0.998667,0.0005552915,0.0003995278,0.00005180687,0.00003552742,0.000007661883,0.000007956988,0.000009317581,0.000265905],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1525161,"threshold_uncertainty_score":0.3962024,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04911241278710513,"score_gpt":0.3847758696030684,"score_spread":0.3356634568159632,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}