{"id":"W2065038846","doi":"10.1371/journal.pone.0026819","title":"Genome-Wide Scan Identifies Loci Associated with Classical BSE Occurrence","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Genetics; Bovine spongiform encephalopathy; PRNP; Locus (genetics); Single-nucleotide polymorphism; Gene; Synteny; Candidate gene; Genome; Disease; Genotype; Prion protein; Medicine; Pathology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005159242,0.0002277715,0.0004113319,0.001005586,0.0003411965,0.0004490499,0.0003433082,0.0004646737,0.002216315],"category_scores_gemma":[0.001162333,0.0001790807,0.000385312,0.00142853,0.0003450711,0.0001513167,0.0003526786,0.0004099425,0.0001665225],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001642021,"about_ca_system_score_gemma":0.0001933217,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007791831,"about_ca_topic_score_gemma":0.01155146,"domain_scores_codex":[0.9995582,0.0001127866,0.00003336911,0.0001792294,0.00006009557,0.00005637982],"domain_scores_gemma":[0.9990465,0.0003488207,0.0002991241,0.00004822782,0.0000782699,0.000178962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004708976,0.00005223017,0.9850287,0.00005204173,0.0004986193,0.0006185628,0.0001462295,0.0001087214,0.009518487,0.00005974124,0.0002416622,0.003204091],"study_design_scores_gemma":[0.000009132632,0.00004506597,0.999311,0.000003031606,0.00006372143,0.0002151099,0.00004245479,0.00006484389,0.0001098917,0.00001775317,0.000116371,0.000001686687],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998686,0.0004358658,0.0001355539,0.00003955758,0.000002960219,0.00000429173,0.000481617,0.000007612973,0.0002065713],"genre_scores_gemma":[0.9987797,0.0001811791,0.0002083377,0.00002475005,0.0000056454,0.000004998014,0.000622282,0.000002267933,0.0001709053],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007791831,"threshold_uncertainty_score":0.01549292,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04281091992179599,"score_gpt":0.2215927395483002,"score_spread":0.1787818196265042,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}