{"id":"W2065091966","doi":"10.1089/aid.2008.0179","title":"High Prevalence of Genetically Similar HIV-1 Recombinants among Infected Sex Workers in Nairobi, Kenya","year":2008,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Clade; Biology; Virology; Virus; Genetic diversity; Human immunodeficiency virus (HIV); Recombination; Lentivirus; Recombinant DNA; Sequence analysis; Genetics; Viral disease; Phylogenetics; Gene; Medicine; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004613395,0.0002741468,0.0002369321,0.0009954604,0.001371151,0.000547257,0.0003799434,0.0006185539,0.001153228],"category_scores_gemma":[0.001167923,0.0004889062,0.0001393219,0.0005327599,0.0009148591,0.0003467432,0.0004381224,0.000432629,0.0001907133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003741605,"about_ca_system_score_gemma":0.0003208496,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02082473,"about_ca_topic_score_gemma":0.0347861,"domain_scores_codex":[0.9995628,0.0001414042,0.0000370703,0.00008766213,0.00008979816,0.00008122248],"domain_scores_gemma":[0.9997197,0.00004748262,0.0001084249,0.00002220678,0.00003118676,0.00007099451],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000867159,0.00003908845,0.9928536,0.00001587714,0.00002494181,0.0002385869,0.001461905,0.00001146308,0.003497763,0.00002572218,0.00004465003,0.001699691],"study_design_scores_gemma":[0.000006299441,0.00009232057,0.9974574,0.00001040299,0.00001329074,0.0007311939,0.001409068,0.00004489316,0.0001320282,0.00001401933,0.00008389161,0.000005165114],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998086,0.00006262628,0.00001380718,0.00001176576,7.025051e-7,0.000003872831,0.00001599044,7.26691e-7,0.00008188833],"genre_scores_gemma":[0.9997503,0.00008144997,0.0000492393,0.00001295916,0.000002025785,0.000002704688,0.00002641254,6.288356e-7,0.00007427203],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02082473,"threshold_uncertainty_score":0.04140705,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04559661652969636,"score_gpt":0.3167373448140252,"score_spread":0.2711407282843288,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}