{"id":"W2065214355","doi":"10.1016/j.chom.2015.04.001","title":"Humoral Immunity in the Gut Selectively Targets Phenotypically Virulent Attaching-and-Effacing Bacteria for Intraluminal Elimination","year":2015,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":156,"is_retracted":false,"has_abstract":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Heart, Lung, and Blood Institute; National Cancer Institute; National Institutes of Health; Mishima Kaiun Memorial Foundation; University of Michigan; Kanae Foundation for the Promotion of Medical Science; Crohn's and Colitis Foundation; Foundation Mishima Haeundae Memorial Foundation; Japan Society for the Promotion of Science; Crohn's and Colitis Foundation of America; National Institute of Diabetes and Digestive and Kidney Diseases; Bill and Melinda Gates Foundation","keywords":"Virulence; Biology; Microbiology; Pathogen; Citrobacter rodentium; Immune system; Innate immune system; Immunity; Bacteria; Enterobacteriaceae; Virology; Immunology; Escherichia coli; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001934709,0.0003652624,0.0002384783,0.0002314674,0.0001388265,0.0004590302,0.0001846662,0.0004273898,0.00232809],"category_scores_gemma":[0.0001586211,0.0001732854,0.0001955803,0.00008193909,0.0002798447,0.0003529586,0.0002489497,0.0008728236,0.0005949354],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002308318,"about_ca_system_score_gemma":0.0002419005,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001882501,"about_ca_topic_score_gemma":0.0003407383,"domain_scores_codex":[0.9998417,0.00003234762,0.000006031316,0.00003291064,0.00002336433,0.00006357483],"domain_scores_gemma":[0.9998714,0.0000192877,0.00002603663,0.00001518442,0.00002370793,0.00004444346],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009836962,0.00002178928,0.0001964815,0.00001644951,0.000001365109,0.00002846306,0.000006423392,0.00002144132,0.9983367,0.0001796699,0.00001490926,0.001077958],"study_design_scores_gemma":[0.00004777242,0.001503382,0.009542805,0.0000210981,0.0000285402,0.0003301431,0.00008714598,0.0006637682,0.9859588,0.0002506196,0.001561524,0.000004495237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9933276,0.001098475,0.002912145,0.0001335015,0.00004929803,0.00002001007,0.00005288337,0.00006249645,0.002343524],"genre_scores_gemma":[0.9949732,0.000505814,0.001907636,0.00007959412,0.00002969102,0.0000136896,0.00007045659,0.00001542745,0.002404612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00232809,"threshold_uncertainty_score":0.007788241,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02389190086106815,"score_gpt":0.2941071451955208,"score_spread":0.2702152443344527,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}