{"id":"W2065403173","doi":"10.1371/journal.ppat.1002521","title":"Phosphorylcholine Allows for Evasion of Bactericidal Antibody by Haemophilus influenzae","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; University of Oxford; University of Pennsylvania","keywords":"Haemophilus influenzae; Phosphorylcholine; Microbiology; Antibody; Phase variation; CHOP; Biology; Epitope; Immunology; Genetics; Gene; Phenotype; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001614357,0.0001615315,0.0003058271,0.00006378657,0.0001216246,0.000006381703,0.0001053343,0.0002193406,0.0004936134],"category_scores_gemma":[0.0000815017,0.0001372793,0.0001276833,0.00009735071,0.00005161806,0.0001320617,0.00005251671,0.0001019687,0.000124658],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001698974,"about_ca_system_score_gemma":0.00001724858,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003200065,"about_ca_topic_score_gemma":0.000001918222,"domain_scores_codex":[0.999079,0.0000611485,0.0003099287,0.0001698324,0.00001560555,0.000364479],"domain_scores_gemma":[0.9993955,0.00008029037,0.0001410495,0.0002345127,0.0001143201,0.0000343329],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001483854,0.0005197708,0.02095493,0.00002948327,0.0001242002,8.578458e-8,0.0001126357,3.916797e-7,0.9749457,0.0001160281,0.001887721,0.001160713],"study_design_scores_gemma":[0.001192822,0.0002496052,0.02699947,0.00002415865,0.000128083,0.00001883028,0.00003338347,0.00000344323,0.8696818,0.00002011751,0.1014566,0.0001917065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957837,0.001747765,0.0001949774,0.00004555162,0.001001954,0.0003386273,0.0006530347,0.00005399503,0.0001803649],"genre_scores_gemma":[0.9983421,0.0001013148,0.0002352028,0.00007256331,0.0001421145,0.00004375784,0.0006837578,0.00002484756,0.0003543282],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1052639,"threshold_uncertainty_score":0.5598086,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02385884831367278,"score_gpt":0.2772437445738037,"score_spread":0.2533848962601309,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}