{"id":"W2066079289","doi":"10.1074/jbc.m109.010108","title":"Autoprocessing of the Escherichia coli AIDA-I Autotransporter","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Department of Education of Guangdong Province","keywords":"Escherichia coli; Cleavage (geology); Mutant; Chemistry; Point mutation; Bacterial outer membrane; Bacterial adhesin; Biochemistry; Amino acid; Protein folding; Biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001645988,0.0001216718,0.0002145314,0.000009695992,0.00003876162,0.000009704719,0.0004140033,0.0004108744,0.00003779375],"category_scores_gemma":[0.00008298756,0.0000688662,0.0001990225,0.00009613888,0.0001745582,0.000002060992,0.00004761084,0.0002189637,3.451313e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008120623,"about_ca_system_score_gemma":0.00008567829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":4.962299e-7,"about_ca_topic_score_gemma":1.886522e-7,"domain_scores_codex":[0.9991732,0.00002168918,0.0003999406,0.0001403876,0.0001036473,0.0001611241],"domain_scores_gemma":[0.9992278,0.000005471444,0.0003844135,0.0002014804,0.0001267215,0.00005415511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008918977,0.00008113343,0.001134884,0.00001034413,0.00002228343,0.000002867228,0.000006291628,0.000007572734,0.9961207,0.000008213438,0.0001443913,0.002372119],"study_design_scores_gemma":[0.0002896725,0.0003552247,0.02363954,0.00002409204,0.00001651145,0.00005657635,0.00001615872,0.000004075727,0.9665179,0.0002427048,0.00874582,0.00009170755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979311,0.00060123,0.0001293313,0.0006686613,0.0001111468,0.00003729797,0.000006049184,0.000004336724,0.0005108304],"genre_scores_gemma":[0.9983069,0.0001759082,0.0008286954,0.0002950885,0.0002819212,4.339719e-7,0.000004499333,0.000004581826,0.0001019261],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0296028,"threshold_uncertainty_score":0.316904,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01071246597601093,"score_gpt":0.2285966024416012,"score_spread":0.2178841364655903,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}