{"id":"W2066862513","doi":"10.1371/journal.pone.0025075","title":"Reduced Transmissibility of East African Indian Strains of Mycobacterium tuberculosis","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"Montreal General Hospital; McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium tuberculosis; Tuberculosis; Cohort; Odds ratio; Population; Medicine; Transmission (telecommunications); Lineage (genetic); Cohort study; Confidence interval; Transmissibility (structural dynamics); Demography; Biology; Internal medicine; Genetics; Pathology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005307714,0.0001426802,0.0007592243,0.0001766726,0.00002317112,0.000001547114,0.0001527608,0.000148158,0.00121013],"category_scores_gemma":[0.0006954954,0.0001197338,0.0001675187,0.0002771957,0.0003047759,0.00005996209,0.00003265934,0.0002614351,0.00001696338],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004365892,"about_ca_system_score_gemma":0.0001454731,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000673194,"about_ca_topic_score_gemma":0.00006343897,"domain_scores_codex":[0.9982133,0.0001822077,0.0005669171,0.0002911091,0.0003518415,0.0003946404],"domain_scores_gemma":[0.9986659,0.0000714992,0.0001292874,0.000534303,0.0002339102,0.0003650916],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007126244,0.005149767,0.1393506,0.001351701,0.000929011,0.00001480385,0.004289231,7.296859e-8,0.8461093,0.00009211102,0.0000882395,0.001912541],"study_design_scores_gemma":[0.0007077438,0.001098376,0.6593526,0.0002539063,0.0002496794,0.000006180078,0.000419673,0.00002716119,0.3375938,0.0001838411,0.00001162856,0.00009539736],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9872819,0.00009896121,0.000008197859,0.001329685,0.00001484048,0.0004238019,0.000102654,0.0000298916,0.01071005],"genre_scores_gemma":[0.9965922,0.0001269004,0.002959044,0.00009110261,0.00005687185,0.00002343006,0.00003076946,0.00001949908,0.0001002166],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.520002,"threshold_uncertainty_score":0.9997029,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1121239813809251,"score_gpt":0.2921535596991239,"score_spread":0.1800295783181988,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}