{"id":"W2067083428","doi":"10.1007/s10142-011-0214-7","title":"Identification of essential genes in C. jejuni genome highlights hyper-variable plasticity regions","year":2011,"lang":"en","type":"article","venue":"Functional & Integrative Genomics","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Biology; Campylobacter jejuni; Gene; Genome; Transposable element; Genetics; Mutant; Forward genetics; Computational biology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001039952,0.0002611082,0.0003815848,0.0004561789,0.0003043654,0.0003381984,0.0002849311,0.0003666694,0.001692834],"category_scores_gemma":[0.0004007121,0.0001765289,0.0004519631,0.0004642142,0.000338007,0.000170797,0.0003461529,0.0006909582,0.0003793775],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002223218,"about_ca_system_score_gemma":0.0002505924,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008038469,"about_ca_topic_score_gemma":0.001463951,"domain_scores_codex":[0.9998996,0.00001156588,0.000007213068,0.00003677421,0.00002194044,0.00002280823],"domain_scores_gemma":[0.999647,0.0001292862,0.00006634868,0.00004752139,0.00003350026,0.00007628446],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004139965,0.00003667689,0.002972058,0.00006532541,0.00002011285,0.0003084867,0.00006090688,0.0004549108,0.9911266,0.000228082,0.00006279456,0.00425007],"study_design_scores_gemma":[0.00009185439,0.0007195048,0.3664921,0.00004821129,0.0002378646,0.003118789,0.0003439022,0.008526091,0.6145478,0.001622398,0.004183049,0.00006838869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952329,0.000161241,0.003109371,0.00006229884,0.000008684991,0.00001744473,0.000586417,0.00007343356,0.000748263],"genre_scores_gemma":[0.9975176,0.00004388396,0.001397638,0.00003829983,0.000007164851,0.00001276297,0.0006251058,0.00002496285,0.0003326955],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001692834,"threshold_uncertainty_score":0.005663097,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04008575930832507,"score_gpt":0.221060174857712,"score_spread":0.1809744155493869,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}