{"id":"W2067298056","doi":"10.1101/gr.133850.111","title":"A vast collection of microbial genes that are toxic to bacteria","year":2012,"lang":"en","type":"article","venue":"Genome Research","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Basic Energy Sciences; National Institute of Allergy and Infectious Diseases; Office of Science; National Institutes of Health; Azrieli Foundation; Israel Science Foundation; U.S. Department of Energy","keywords":"Biology; Cloning (programming); Gene; Genome; Escherichia coli; Genetics; Computational biology; Molecular cloning; DNA; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003856207,0.0007434227,0.000996545,0.001171984,0.00044595,0.0009167088,0.0002710114,0.0007573499,0.0008682701],"category_scores_gemma":[0.0009951361,0.0002827179,0.0005958606,0.002137582,0.0004556498,0.0005811534,0.00055319,0.0006289491,0.00075414],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003198845,"about_ca_system_score_gemma":0.0004116455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002712811,"about_ca_topic_score_gemma":0.0003496183,"domain_scores_codex":[0.9992041,0.0000797106,0.00006564873,0.000176101,0.0004059505,0.00006858088],"domain_scores_gemma":[0.9991301,0.0002541905,0.0002619762,0.0001422386,0.0001391402,0.00007231232],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000107207,0.00003131813,0.004534105,0.0002552965,0.00003072273,0.0002525268,0.00006555231,0.0002793477,0.980415,0.0001755387,0.0001465536,0.01370691],"study_design_scores_gemma":[0.0000154442,0.0005097858,0.1008804,0.0001397409,0.0002552262,0.006765265,0.0004234752,0.001460926,0.8682575,0.002015405,0.01922912,0.00004778205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9648905,0.01206569,0.01495728,0.0004304232,0.00006125132,0.00007095263,0.004886612,0.0003646636,0.002272506],"genre_scores_gemma":[0.9508953,0.009413395,0.02030399,0.0006310008,0.0000693351,0.0001378332,0.01559445,0.0001780358,0.002776618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001171984,"threshold_uncertainty_score":0.002904594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05156447332761491,"score_gpt":0.3165263391224395,"score_spread":0.2649618657948246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}