{"id":"W2067566372","doi":"10.1186/1471-2180-7-42","title":"Indole is an inter-species biofilm signal mediated by SdiA","year":2007,"lang":"en","type":"article","venue":"BMC Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":466,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Army Research Office; Institute of Genetics; National Institute of Biomedical Imaging and Bioengineering; National Institutes of Health; Madurai Kamaraj University; Keio University; University of Connecticut","keywords":"Biofilm; Quorum sensing; Indole test; Microbiology; Biology; Mutant; Homoserine; Motility; Escherichia coli; Tryptophanase; Swarming motility; Extracellular polymeric substance; Pseudomonas aeruginosa; Bacteria; Biochemistry; Gene; Cell biology; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009021834,0.0004241253,0.0002112701,0.0002246855,0.0001531197,0.0003373528,0.0002094762,0.0002462645,0.0008111641],"category_scores_gemma":[0.0001099591,0.0001196849,0.0002550714,0.0001369868,0.0001843487,0.0001490726,0.0003237286,0.0003974621,0.0003265827],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000368187,"about_ca_system_score_gemma":0.0002712738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008491543,"about_ca_topic_score_gemma":0.001044123,"domain_scores_codex":[0.9998204,0.00001474501,0.00001218977,0.00004149951,0.00007399753,0.00003718478],"domain_scores_gemma":[0.999818,0.00002310557,0.00006457901,0.00001581498,0.0000409768,0.00003747372],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001694605,0.00000598822,0.0002296563,0.00001134699,9.535493e-7,0.00001330668,0.000003359344,0.000007499323,0.999461,0.00001663512,0.00001068341,0.0002227224],"study_design_scores_gemma":[0.000005723371,0.00009566802,0.01407626,0.00000622882,0.00001024833,0.0001677399,0.00003456942,0.000976107,0.9835992,0.00004029954,0.0009831765,0.000004787572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937686,0.0006413287,0.003934137,0.0000987226,0.00002192676,0.00001833423,0.0004360465,0.00008589094,0.000994947],"genre_scores_gemma":[0.9947937,0.0002320051,0.002886454,0.00004998827,0.000007084943,0.00001807722,0.0007289746,0.00001898742,0.001264798],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008491543,"threshold_uncertainty_score":0.002713621,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01371701375618411,"score_gpt":0.2328014535289848,"score_spread":0.2190844397728007,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}