{"id":"W2067702417","doi":"10.1128/jb.184.11.2855-2856.2002","title":"Evolving Insights: Symbiosis Islands and Horizontal Gene Transfer","year":2002,"lang":"en","type":"letter","venue":"Journal of Bacteriology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Horizontal gene transfer; Pathogenicity island; Genome; Symbiosis; Genomic island; Genetics; Mesorhizobium; Gene; Evolutionary biology; Genome evolution; Plasmid; Rhizobia; Comparative genomics; Genomics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00283769,0.0008023068,0.0009404527,0.0004368244,0.001560474,0.002992765,0.001534297,0.01817843,0.004138588],"category_scores_gemma":[0.00615068,0.0004850418,0.0005058412,0.0004720638,0.00363589,0.005672998,0.00124749,0.0167876,0.002898479],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002344747,"about_ca_system_score_gemma":0.0009670306,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005697403,"about_ca_topic_score_gemma":0.0009428702,"domain_scores_codex":[0.998648,0.0003700115,0.0001435699,0.0002268982,0.0004486578,0.000162817],"domain_scores_gemma":[0.9952433,0.003113456,0.0003362586,0.0002248443,0.0005863829,0.000495891],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004187767,0.0001171449,0.002667018,0.001016864,0.0000613551,0.01971496,0.0007289334,0.0004481068,0.005564399,0.05343328,0.7264391,0.1893901],"study_design_scores_gemma":[0.000256626,0.0002421435,0.002207653,0.0005076185,0.00005823572,0.02610645,0.001173051,0.001429205,0.002026984,0.1118453,0.8540829,0.00006386299],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"commentary","genre_scores_codex":[0.002804011,0.03961362,0.00157876,0.9292471,0.02185198,0.00001755647,0.00004893715,0.00005264083,0.004785443],"genre_scores_gemma":[0.0477169,0.07286559,0.002480329,0.7116969,0.153705,0.00006561975,0.00009696269,0.00004613911,0.01132661],"genre_candidate":"commentary","genre_consensus":"commentary","teacher_disagreement_score":0.01817843,"threshold_uncertainty_score":0.01701236,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01395779833318733,"score_gpt":0.191304862503403,"score_spread":0.1773470641702157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}