{"id":"W2068587314","doi":"10.1007/s00438-011-0634-z","title":"Ustilago maydis transcript features identified through full-length cDNA analysis","year":2011,"lang":"en","type":"article","venue":"Molecular Genetics and Genomics","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; ORFS; Genetics; Gene; Complementary DNA; Open reading frame; Untranslated region; Transcription (linguistics); Ustilago; Genome; Messenger RNA; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006274064,0.0001996909,0.0002256214,0.00002221902,0.0001345702,0.00007990465,0.0002228444,0.0001225437,0.0001155893],"category_scores_gemma":[0.000002512706,0.0001033472,0.0001916295,0.0003149665,0.00007354762,0.00002915249,0.00004449948,0.00007987691,0.000008749104],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001098358,"about_ca_system_score_gemma":0.000007988278,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007320176,"about_ca_topic_score_gemma":0.0006406798,"domain_scores_codex":[0.9989333,0.00003622502,0.0002027059,0.0003570984,0.0001543334,0.0003163068],"domain_scores_gemma":[0.9996199,0.00001420907,0.00004874396,0.0001243015,0.0000408194,0.0001520474],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009081807,0.0001269188,0.002711521,0.00001942951,0.0008211072,0.0001090277,0.001003301,0.0001623569,0.9680216,0.0009571111,0.0005974371,0.02537941],"study_design_scores_gemma":[0.0004268661,0.0003752664,0.8414718,0.0000140876,0.002449022,0.00003204456,0.001167136,0.0006098538,0.1162362,0.01150393,0.02447409,0.001239695],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9844192,0.01270403,0.0004776051,0.00008013638,0.00009057005,0.000147101,0.0002323941,0.00003153411,0.001817421],"genre_scores_gemma":[0.9942043,0.003910126,0.001235305,0.0002958678,0.00005197085,0.000009540894,0.0001413313,0.000002913131,0.0001486689],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8517854,"threshold_uncertainty_score":0.4214378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01856998133964763,"score_gpt":0.1965833117733561,"score_spread":0.1780133304337085,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}