{"id":"W2068967346","doi":"10.1186/1471-2164-12-472","title":"Transcriptional responses of Burkholderia cenocepacia to polymyxin B in isogenic strains with diverse polymyxin B resistance phenotypes","year":2011,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; University of North Carolina at Chapel Hill; Cardiff University; Cystic Fibrosis Canada","keywords":"Polymyxin B; Polymyxin; Microbiology; Biology; Burkholderia cenocepacia; Bacterial outer membrane; Mutant; Gene; Bacteria; Burkholderia; Genetics; Antibiotics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002401476,0.0003759857,0.000314966,0.0003443578,0.0001470224,0.0003420909,0.0002532947,0.0003858599,0.0006868974],"category_scores_gemma":[0.0004288791,0.0001736743,0.0003041415,0.000376876,0.0003477257,0.0001795273,0.0003264009,0.0007051126,0.0002565229],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000349163,"about_ca_system_score_gemma":0.000179257,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001210667,"about_ca_topic_score_gemma":0.0008845849,"domain_scores_codex":[0.9995987,0.00005658282,0.00004932926,0.0001021014,0.0001068268,0.00008651587],"domain_scores_gemma":[0.9995857,0.00009162081,0.000117965,0.00006019869,0.00007535286,0.00006923173],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008532651,0.00002429392,0.00050725,0.00001073428,0.000002368326,0.00001175803,0.0000201968,0.00002313403,0.999041,0.00001085203,0.000007943606,0.000255195],"study_design_scores_gemma":[0.00003002034,0.0007497777,0.06191953,0.000009773159,0.00003215547,0.0002996692,0.000278589,0.001082829,0.9346472,0.00007006567,0.0008629003,0.00001750124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971307,0.0001736042,0.001385485,0.00005708629,0.000009834157,0.00003004535,0.0008807983,0.00003201249,0.0003003648],"genre_scores_gemma":[0.9937311,0.0001898328,0.00301856,0.00007880259,0.000008202753,0.000131603,0.002002523,0.00002359858,0.0008156722],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001210667,"threshold_uncertainty_score":0.002533376,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05445346609065276,"score_gpt":0.2862265039440869,"score_spread":0.2317730378534341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}