{"id":"W2068993113","doi":"10.1371/journal.pone.0022300","title":"Regulation of Oxidative Stress Response by CosR, an Essential Response Regulator in Campylobacter jejuni","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":90,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Campylobacter jejuni; Regulon; Oxidative stress; Biology; Electrophoretic mobility shift assay; Regulator; Response regulator; Campylobacter; Gene knockdown; Wild type; Molecular biology; Microbiology; Cell biology; Regulation of gene expression; Biochemistry; Gene; Mutant; Gene expression; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001133972,0.0001671171,0.0003704729,0.00003908425,0.00005946239,0.00001150933,0.0002813426,0.0002067217,0.0009995552],"category_scores_gemma":[0.0004108225,0.00008065143,0.00005879735,0.0003166773,0.0001523538,0.0002164515,0.00006439938,0.0001289707,0.00002060459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004138515,"about_ca_system_score_gemma":0.00001546219,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004733188,"about_ca_topic_score_gemma":0.0004242547,"domain_scores_codex":[0.9970319,0.001608972,0.000436055,0.0003865462,0.0002275612,0.0003090258],"domain_scores_gemma":[0.9987341,0.0006320771,0.0002295612,0.0001610344,0.0001199807,0.0001232763],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.009013387,0.001667027,0.08110005,0.00000565288,0.00003226331,0.000003239665,0.0004900155,4.72986e-7,0.9070542,0.00004949697,0.0001222053,0.0004619425],"study_design_scores_gemma":[0.0002017837,0.000692645,0.6353728,0.0000456995,0.00001744764,9.454269e-7,0.0002200533,0.00002826302,0.362867,0.0003636357,0.00006151426,0.0001282424],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988576,0.0000538057,0.000002348062,0.0004562794,0.00003267908,0.0002617224,0.0001562618,0.00004296494,0.0001363427],"genre_scores_gemma":[0.9988781,0.00001689377,0.0003794038,0.0001096101,0.00005724429,0.00002045524,0.0001383687,0.000002353878,0.0003975716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5542728,"threshold_uncertainty_score":0.9999137,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05983264651242678,"score_gpt":0.2324764312449113,"score_spread":0.1726437847324845,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}