{"id":"W2069178899","doi":"10.1128/jb.02590-14","title":"Biosynthesis of the Common Polysaccharide Antigen of Pseudomonas aeruginosa PAO1: Characterization and Role of GDP- <scp>d</scp> -Rhamnose:GlcNAc/GalNAc-Diphosphate-Lipid α1,3- <scp>d</scp> -Rhamnosyltransferase WbpZ","year":2015,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Biochemistry; Biosynthesis; Complementation; Glycosyltransferase; Biology; Mutant; Gene cluster; Stereochemistry; Enzyme; Chemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008720355,0.0004913097,0.001574808,0.0002077219,0.00009949588,0.00003515716,0.0008377921,0.0005920924,0.0001076597],"category_scores_gemma":[0.001702627,0.000390478,0.0005240593,0.000349096,0.0006109762,0.0003237285,0.0001922437,0.0005477557,0.00000245212],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009592976,"about_ca_system_score_gemma":0.0003604293,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001599791,"about_ca_topic_score_gemma":0.00001969259,"domain_scores_codex":[0.9963636,0.0002688249,0.00193943,0.0003919053,0.0005149302,0.0005213288],"domain_scores_gemma":[0.9945412,0.001443875,0.00236286,0.0007110172,0.0005955219,0.000345468],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001368567,0.0003069648,0.07069284,0.0002984406,0.0003657227,0.00001884164,0.0018344,0.00001671372,0.9248595,0.00003646967,0.0001490998,0.001284171],"study_design_scores_gemma":[0.001051434,0.0001842758,0.03056126,0.0003469374,0.0002819354,0.0002917108,0.001853287,0.00008057628,0.961382,0.0001619671,0.003698354,0.0001062588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970199,0.0007638198,0.0000416594,0.0001710711,0.0003470947,0.0001425955,0.000501499,0.00001991956,0.0009923647],"genre_scores_gemma":[0.9980974,0.0009697912,0.0001208102,0.00005157733,0.0003181158,0.000006605916,0.00003657457,0.00005595946,0.0003431805],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04013158,"threshold_uncertainty_score":0.9998547,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01222040118973122,"score_gpt":0.2151292836207612,"score_spread":0.2029088824310299,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}