{"id":"W2069389944","doi":"10.1139/gen-2013-0072","title":"Association analysis for feed efficiency traits in beef cattle using preserved haplotypes","year":2013,"lang":"en","type":"article","venue":"Genome","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph; University of Alberta","funders":"Agriculture and Agri-Food Canada; Beef Cattle Research Council; University of Guelph","keywords":"Biology; Haplotype; Beef cattle; Quantitative trait locus; Genetics; Crossbreed; Genetic association; Genome-wide association study; Single-nucleotide polymorphism; Animal science; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001184174,0.0001772569,0.0003384319,0.0009916513,0.0002546522,0.0003767945,0.0002268447,0.0001981077,0.001137457],"category_scores_gemma":[0.001776464,0.0001627316,0.0005546234,0.001182976,0.0002121065,0.0001970256,0.0003622237,0.0002376575,0.0001161756],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009647483,"about_ca_system_score_gemma":0.000176602,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001768562,"about_ca_topic_score_gemma":0.003311374,"domain_scores_codex":[0.9992142,0.0002990767,0.00004794629,0.0002851539,0.00008114771,0.00007249684],"domain_scores_gemma":[0.9988062,0.0005847785,0.0003369812,0.0001131624,0.00006456948,0.00009436694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009460019,0.00004419525,0.941779,0.00008047521,0.001324571,0.000360038,0.0002861211,0.0008538036,0.02903298,0.0001265618,0.0001303182,0.02503585],"study_design_scores_gemma":[0.00004207062,0.0002085886,0.9955141,0.0000116668,0.0004032366,0.0004322559,0.00008741369,0.001552838,0.001154979,0.0001494811,0.0004309133,0.00001241811],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972668,0.0004860013,0.001881795,0.00001490977,0.000004469366,0.000003510535,0.000214069,0.000009018695,0.0001193667],"genre_scores_gemma":[0.9980844,0.0001321724,0.001237174,0.00001261932,0.000008119534,0.000007485746,0.0004125556,0.000005163418,0.0001003632],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001768562,"threshold_uncertainty_score":0.0062626,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01653521237453917,"score_gpt":0.2424779667350318,"score_spread":0.2259427543604926,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}