{"id":"W2069763648","doi":"10.1021/bi801363b","title":"Crystal Structure and Enantiomer Selection by <scp>d</scp>-Alanyl Carrier Protein Ligase DltA from <i>Bacillus cereus</i>","year":2008,"lang":"en","type":"article","venue":"Biochemistry","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Teichoic acid; DNA ligase; Bacillus cereus; Cereus; Biochemistry; Bacillus subtilis; Biology; Chemistry; Bacteria; Peptidoglycan; Cell wall; DNA; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005776017,0.0002474394,0.0001999321,0.00002656488,0.0002673735,0.00006989067,0.0001412987,0.0003024039,0.00030342],"category_scores_gemma":[0.000127083,0.0002184315,0.00004607466,0.0001557367,0.0001671203,0.0001474216,0.00006397728,0.0001950537,0.00001384927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005392376,"about_ca_system_score_gemma":0.00008827677,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002095149,"about_ca_topic_score_gemma":0.00001066447,"domain_scores_codex":[0.9986162,0.0000284718,0.0002175648,0.0005385531,0.0002799313,0.0003193343],"domain_scores_gemma":[0.9993371,0.00003250682,0.0001255239,0.0002606578,0.00007703669,0.0001672065],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001434935,0.00001319237,0.001216028,0.0000323949,0.00001194137,0.000006919109,0.0001574312,0.000001276742,0.9680249,0.00000237979,0.0304418,0.00007736403],"study_design_scores_gemma":[0.0004009607,0.0000383359,0.0006972497,0.00001967148,0.00001872715,0.00009748,0.00007742495,0.00001606766,0.9853927,0.0001113135,0.01300589,0.0001241755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970179,0.0007228798,0.0001115093,0.00002953562,0.0002639278,0.0001534642,0.0009509056,0.0001205161,0.0006293439],"genre_scores_gemma":[0.9949079,0.00001769734,0.0005073751,0.00009087004,0.0005500049,0.00001524776,0.0002369132,0.00002531638,0.003648653],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0174359,"threshold_uncertainty_score":0.8907378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004744641445460639,"score_gpt":0.1849435088374494,"score_spread":0.1801988673919888,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}