{"id":"W2070084873","doi":"10.1128/jcm.01402-12","title":"Longitudinal Analysis of the Evolution and Dissemination of Neisseria gonorrhoeae Strains (Saskatchewan, Canada, 2005 to 2008) Reveals Three Major Circulating Strains and Convergent Evolution of Ciprofloxacin and Azithromycin Resistance","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Saskatchewan Disease Control Laboratory","funders":"National Research Council Canada; Saskatchewan Health Research Foundation","keywords":"Neisseria gonorrhoeae; Biology; Multilocus sequence typing; Ciprofloxacin; Penicillin; Azithromycin; Population; Antibiotic resistance; Microbiology; Gonorrhea; Tetracycline; Typing; Antibiotics; Genetics; Virology; Genotype; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004500109,0.0003303794,0.000244636,0.001046021,0.0009693173,0.0007459326,0.0006087512,0.000342746,0.000754807],"category_scores_gemma":[0.001232697,0.000314918,0.0002752466,0.002105523,0.0006679584,0.0003225801,0.0007934379,0.0005186531,0.0001736395],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.007746284,"about_ca_system_score_gemma":0.009848959,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9375181,"about_ca_topic_score_gemma":0.9683788,"domain_scores_codex":[0.9996278,0.00004410082,0.0000214895,0.00009223344,0.0001016167,0.0001127793],"domain_scores_gemma":[0.9984815,0.0001139073,0.0003034315,0.0000837256,0.00072521,0.0002922403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005436111,0.00001970448,0.9938279,0.00001070831,0.00004841118,0.00005937337,0.0003315973,0.0001072387,0.001771967,0.00001917708,0.00014676,0.003602807],"study_design_scores_gemma":[0.000002311433,0.00001898756,0.9990692,0.00000478048,0.000009607068,0.00003419244,0.0003777568,0.0001895708,0.0001260856,0.00000497061,0.0001586504,0.000003929209],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990839,0.0001098623,0.00008289459,0.00003961207,0.000001772582,0.00001121553,0.0004556981,0.00000344662,0.0002116091],"genre_scores_gemma":[0.9982538,0.0002138544,0.0002196289,0.00004606183,0.000001752825,0.00001164208,0.0008684921,0.000001986459,0.0003827639],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06248194,"threshold_uncertainty_score":0.1256998,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02682679221665877,"score_gpt":0.3396878808410964,"score_spread":0.3128610886244376,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}