{"id":"W2071141055","doi":"10.1110/ps.0224503","title":"Directing the mode of nitrite binding to a copper‐containing nitrite reductase from <i>Alcaligenes faecalis</i> S‐6: Characterization of an active site isoleucine","year":2003,"lang":"en","type":"article","venue":"Protein Science","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Alcaligenes faecalis; Nitrite reductase; Nitrite; Chemistry; Active site; Heme; Biochemistry; Binding site; Mutagenesis; Stereochemistry; Enzyme; Mutant; Biology; Nitrate reductase; Bacteria; Nitrate; Organic chemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001324709,0.0002882929,0.0002539011,0.00008018047,0.00011998,0.0002917912,0.000290843,0.0002159471,0.0002333069],"category_scores_gemma":[0.0002072915,0.0001033464,0.0002244977,0.0001265648,0.0002703289,0.0001032733,0.000141635,0.0002736296,0.0001908181],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003593211,"about_ca_system_score_gemma":0.0002704964,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002222423,"about_ca_topic_score_gemma":0.003296211,"domain_scores_codex":[0.9998841,0.00002135061,0.00001213497,0.00002324958,0.00004148071,0.00001763712],"domain_scores_gemma":[0.9998896,0.00001943097,0.00003416922,0.000009536312,0.0000193326,0.00002791855],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005132837,0.00001447321,0.0005047076,0.00001443764,0.000004695286,0.00007066818,0.00002452181,0.0002059059,0.9984697,0.00003885796,0.00001250579,0.0005883009],"study_design_scores_gemma":[0.00001139053,0.0001981665,0.004142104,0.000004944474,0.00001953041,0.0003139798,0.00007076364,0.001443012,0.9929662,0.00002738185,0.0007934824,0.000009132033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985294,0.00009054937,0.001023414,0.00002290327,0.000003453354,0.000006676128,0.00004997526,0.00001824613,0.0002552912],"genre_scores_gemma":[0.9975593,0.00006538148,0.001818759,0.00002008121,0.000001985602,0.000005305608,0.0001663196,0.00001638209,0.0003463922],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002222423,"threshold_uncertainty_score":0.004418969,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01110559225001237,"score_gpt":0.2703715901398034,"score_spread":0.259265997889791,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}