{"id":"W2071442384","doi":"10.1186/1471-2164-13-4","title":"Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel","year":2012,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Planarian Biology and Electrostimulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Institute of Infection and Immunity","funders":"University of Glasgow; Wellcome Trust","keywords":"Biology; Brugia malayi; Haemonchus contortus; Piwi-interacting RNA; microRNA; Brugia pahangi; Genetics; Argonaute; Gene; DNA microarray; Caenorhabditis elegans; Nematode; Genome; Regulation of gene expression; Deep sequencing; RNA interference; Computational biology; Gene expression; Transposable element; RNA; Ecology; Filariasis; Helminths","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001505908,0.000298678,0.0003386547,0.0006463552,0.0003852566,0.0004195831,0.0001863874,0.0003442157,0.001492139],"category_scores_gemma":[0.0005806618,0.0001646928,0.0002744712,0.0004854917,0.0002392749,0.0004119576,0.0004350278,0.000344132,0.0005456887],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001854244,"about_ca_system_score_gemma":0.000230647,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003943299,"about_ca_topic_score_gemma":0.0009059039,"domain_scores_codex":[0.9997717,0.00001586041,0.0000153432,0.0001279857,0.00004515004,0.00002399941],"domain_scores_gemma":[0.9996228,0.00007439987,0.0001476234,0.00003612089,0.00005943628,0.00005955168],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002835518,0.00002404971,0.02740807,0.000522692,0.0001352912,0.0003548893,0.0003433217,0.0002148796,0.9445155,0.0005131114,0.0004148536,0.02526974],"study_design_scores_gemma":[0.00002755123,0.0004949847,0.8533694,0.0001704699,0.0003304353,0.00694521,0.0004691754,0.001729665,0.08453651,0.00126353,0.05060056,0.00006245038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9808159,0.004993662,0.005364135,0.0001631261,0.00004433608,0.00003681091,0.004502927,0.00025124,0.003827777],"genre_scores_gemma":[0.9805626,0.001933455,0.007528385,0.0002260492,0.00003447998,0.00007281933,0.007215294,0.00007017099,0.00235664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001492139,"threshold_uncertainty_score":0.00499171,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02833990261109745,"score_gpt":0.2433496514234606,"score_spread":0.2150097488123632,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}