{"id":"W2071487106","doi":"10.1110/ps.073273008","title":"Solution structure of ribosomal protein L40E, a unique C4 zinc finger protein encoded by archaeon <i>Sulfolobus solfataricus</i>","year":2008,"lang":"en","type":"article","venue":"Protein Science","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium; University of Toronto; Ontario Institute for Cancer Research","funders":"Pacific Northwest National Laboratory; Biological and Environmental Research; National Institutes of Health; Canada Research Chairs; Genome Canada; National Institute of General Medical Sciences; Battelle; U.S. Department of Energy","keywords":"Sulfolobus solfataricus; Ribosomal protein; Sulfolobus; 50S; Archaea; Protein subunit; Crystallography; Zinc finger; Eukaryotic Large Ribosomal Subunit; Biology; Ribosomal RNA; Protein structure; Biochemistry; Chemistry; Ribosome; RNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007375862,0.0003912722,0.0003511004,0.0001354935,0.0005342707,0.00004150597,0.001093369,0.0003297518,0.00006818111],"category_scores_gemma":[0.000655653,0.0003471982,0.0001313404,0.0005888868,0.001293529,0.00005489534,0.0004432382,0.0002543756,0.00002010734],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005988202,"about_ca_system_score_gemma":0.000670661,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002623231,"about_ca_topic_score_gemma":0.00003281471,"domain_scores_codex":[0.9965639,0.0002097518,0.0005271302,0.001024358,0.0008720965,0.0008028211],"domain_scores_gemma":[0.9980382,0.00001060756,0.0004016889,0.0008562204,0.0004605603,0.0002327394],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001705644,0.00009756366,0.00006047635,0.0000597071,0.00001340071,0.000006643553,0.00009422513,0.000007954171,0.9974789,0.000454078,0.0002366285,0.001319853],"study_design_scores_gemma":[0.0004440408,0.000722949,0.00006981367,0.00012332,0.000006738101,0.00003914696,0.00001262972,0.00008818274,0.9920845,0.001272745,0.004704521,0.0004314002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9820256,0.00055356,0.01361276,0.0002464863,0.0001107968,0.002715802,0.00009958136,0.00004804599,0.0005873477],"genre_scores_gemma":[0.9686912,0.00002439654,0.02880221,0.00008227505,0.0001325462,0.0003476563,0.00004800979,0.00003738033,0.001834373],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01518945,"threshold_uncertainty_score":0.999898,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0101612230063249,"score_gpt":0.220971284994379,"score_spread":0.210810061988054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}