{"id":"W2072057010","doi":"10.1128/genomea.01036-14","title":"Genome Sequence of a Tigecycline-Resistant Clinical Isolate of Acinetobacter baumannii Strain AB031 Obtained from a Bloodstream Infection","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; University of Manitoba","keywords":"Tigecycline; Acinetobacter baumannii; Whole genome sequencing; Biology; Strain (injury); Microbiology; Bloodstream infection; Genome; Virology; Genetics; Gene; Antibiotics; Bacteria; Pseudomonas aeruginosa","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005848502,0.0002708363,0.0004836485,0.00006686823,0.00005600336,0.00002038346,0.0003329369,0.0002467856,0.00009722975],"category_scores_gemma":[0.0001440881,0.000260396,0.0002005421,0.0001368651,0.0002453926,0.00001372748,0.0001577811,0.0001226058,0.00001928073],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002946431,"about_ca_system_score_gemma":0.0001160618,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001774011,"about_ca_topic_score_gemma":0.00007853612,"domain_scores_codex":[0.9976063,0.0001870725,0.001030718,0.000575938,0.0002503557,0.0003495711],"domain_scores_gemma":[0.9982342,0.0000304019,0.0006285904,0.0007531945,0.0002429474,0.0001106891],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003937636,0.0002145434,0.08208138,0.00005273692,0.00024875,0.00000184431,0.0000520834,0.000030404,0.9163555,0.00001815185,0.00003077663,0.0005200765],"study_design_scores_gemma":[0.002172157,0.001900334,0.9305568,0.00008947546,0.0001372539,0.000002692341,0.00004479029,0.00007409206,0.01625353,0.0002565086,0.04805598,0.0004563242],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949434,0.0001618211,0.002221847,0.00002797106,0.0002786416,0.0002990858,0.001296941,0.00001343904,0.0007568255],"genre_scores_gemma":[0.9952943,0.0003617434,0.001495984,0.0001061262,0.0003287178,0.000006298489,0.001893546,0.0000310014,0.000482305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.900102,"threshold_uncertainty_score":0.9999848,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02570479241588721,"score_gpt":0.3006048725303153,"score_spread":0.2749000801144281,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}