{"id":"W2072166260","doi":"10.1016/j.watres.2013.07.041","title":"Bacteria, viruses, and parasites in an intermittent stream protected from and exposed to pasturing cattle: Prevalence, densities, and quantitative microbial risk assessment","year":2013,"lang":"en","type":"article","venue":"Water Research","topic":"Fecal contamination and water quality","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary; University of Alberta; Public Health Agency of Canada; Environment and Climate Change Canada; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Water Research Institute","keywords":"Cryptosporidium; Pasture; Giardia; Biology; Indicator bacteria; Campylobacter; Veterinary medicine; Feces; Fecal coliform; Livestock; Norovirus; Rotavirus; Riparian zone; Microbiology; Animal science; Ecology; Bacteria; Water quality; Outbreak; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007528584,0.0001211727,0.0001406017,0.00009350706,0.0001469123,0.0002963018,0.0001153468,0.00005192488,0.0004287904],"category_scores_gemma":[0.00004329125,0.00008741931,0.000008276126,0.00008252026,0.0002585975,0.0004498685,0.0004782793,0.0002394048,0.00006077505],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001086936,"about_ca_system_score_gemma":0.000006746894,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01368653,"about_ca_topic_score_gemma":0.003700896,"domain_scores_codex":[0.9980224,0.0007392334,0.0001969779,0.0004503829,0.0002558244,0.0003352323],"domain_scores_gemma":[0.9995277,0.00006751587,0.00002304847,0.0001643958,0.00003295276,0.0001843687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004493184,0.00005841221,0.4992062,0.00002214126,0.000005405236,0.000003866128,0.006055754,0.000001715625,0.4898361,0.00000358088,0.00004687962,0.004714982],"study_design_scores_gemma":[0.0004023413,0.000292529,0.9425051,0.00003974489,0.000002936004,0.000001315775,0.0006799208,0.0004534071,0.05517264,0.0002136349,0.0001100924,0.0001263405],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986299,0.00001388919,0.00003661247,0.0003053329,0.00001894701,0.000907382,0.00003774899,0.0000139046,0.00003622857],"genre_scores_gemma":[0.9976261,0.00001973412,0.00194607,0.00007517341,0.00001154457,0.0001303511,0.00001600072,0.000009784039,0.0001652811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4432989,"threshold_uncertainty_score":0.9928814,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06802355584847536,"score_gpt":0.3530605435333441,"score_spread":0.2850369876848687,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}