{"id":"W2072166260","doi":"10.1016/j.watres.2013.07.041","title":"Bacteria, viruses, and parasites in an intermittent stream protected from and exposed to pasturing cattle: Prevalence, densities, and quantitative microbial risk assessment","year":2013,"lang":"en","type":"article","venue":"Water Research","topic":"Fecal contamination and water quality","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary; University of Alberta; Public Health Agency of Canada; Environment and Climate Change Canada; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Alberta Water Research Institute","keywords":"Cryptosporidium; Pasture; Giardia; Biology; Indicator bacteria; Campylobacter; Veterinary medicine; Feces; Fecal coliform; Livestock; Norovirus; Rotavirus; Riparian zone; Microbiology; Animal science; Ecology; Bacteria; Water quality; Outbreak; Virology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002290369,0.0002463019,0.0002583023,0.0009496499,0.0008496649,0.0006114332,0.00026995,0.0005337541,0.0004688491],"category_scores_gemma":[0.0004637652,0.0001977821,0.0002542934,0.0005529391,0.0005932749,0.0003987575,0.0004180853,0.0002760939,0.00006131459],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004075729,"about_ca_system_score_gemma":0.000301428,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01167081,"about_ca_topic_score_gemma":0.01677923,"domain_scores_codex":[0.9997756,0.00005311904,0.00002066532,0.00003948669,0.00005418005,0.00005698521],"domain_scores_gemma":[0.9997342,0.00005241567,0.00009129101,0.000009240258,0.00004547503,0.00006732706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002684625,0.0001814242,0.9931743,0.000008022197,0.00001907518,0.0002200098,0.0004776462,0.000130396,0.003908166,0.00002579253,0.00003140931,0.001555445],"study_design_scores_gemma":[0.000004577641,0.0004650075,0.9950306,0.00000452117,0.00002646983,0.0005013265,0.001603208,0.001206292,0.001020192,0.00005194492,0.00008051964,0.000005352015],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998492,0.00001115883,0.00003513363,0.00000573046,6.366814e-7,0.000002292207,0.00003267586,6.247289e-7,0.00006260231],"genre_scores_gemma":[0.9996761,0.00002193619,0.0001011601,0.000004403762,0.000002622611,0.000003270236,0.00006052497,3.128409e-7,0.0001296347],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01167081,"threshold_uncertainty_score":0.02320576,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06802355584847536,"score_gpt":0.3530605435333441,"score_spread":0.2850369876848687,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}