{"id":"W2072281124","doi":"10.1371/journal.ppat.1002758","title":"Identification of a General O-linked Protein Glycosylation System in Acinetobacter baumannii and Its Role in Virulence and Biofilm Formation","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":220,"is_retracted":false,"has_abstract":true,"ca_institutions":"Defence Research and Development Canada; University of Alberta; Institute for Biological Sciences; Alberta Glycomics Centre","funders":"Canadian Institutes of Health Research; Alberta Innovates; Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research; Alberta Glycomics Centre; Fondation pour la Recherche Médicale; Austrian Science Fund; University of Alberta","keywords":"Acinetobacter baumannii; Virulence; Glycosylation; Microbiology; Biofilm; Biology; Galleria mellonella; Glycoprotein; Dictyostelium discoideum; Glycan; Gene; Bacteria; Genetics; Pseudomonas aeruginosa","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002241087,0.00008668392,0.0001136378,0.00006904941,0.00001921698,0.00001206959,0.00004596314,0.0001068574,0.000001683554],"category_scores_gemma":[0.00004659194,0.00008595566,0.00001352207,0.00007370595,0.00002117319,0.00003195586,0.00003639116,0.00003801311,0.000002102691],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002280655,"about_ca_system_score_gemma":0.000009871441,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007430168,"about_ca_topic_score_gemma":0.00002152722,"domain_scores_codex":[0.9992492,0.00006655391,0.0003048687,0.0001582089,0.00007462325,0.0001466012],"domain_scores_gemma":[0.9996501,0.000004185556,0.0001422614,0.0001283631,0.00004184694,0.00003322619],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004475297,0.00003621695,0.06780032,0.0001508173,0.000004139835,3.913116e-7,0.0001884027,0.000003381874,0.9313381,0.0001219121,8.177954e-7,0.0003108016],"study_design_scores_gemma":[0.0002531678,0.0000322355,0.3571685,0.00008374191,0.000007018843,0.000004332756,0.000112037,0.003546498,0.6386861,0.000008016203,0.00001531119,0.0000830667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985347,0.0007845822,0.0001753857,0.000009337654,0.00002413781,0.0003965729,0.0000290788,0.000005065027,0.00004116725],"genre_scores_gemma":[0.9993919,0.0000716194,0.0003590293,0.00000652152,0.00004879961,0.00002373839,0.00006020733,0.000009085656,0.00002913572],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.292652,"threshold_uncertainty_score":0.350517,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01083833897620779,"score_gpt":0.2262232546575105,"score_spread":0.2153849156813027,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}