{"id":"W2072737923","doi":"10.1016/j.bbapap.2009.09.008","title":"Protein kinase and phosphatase signaling in Mycobacterium tuberculosis physiology and pathogenesis","year":2009,"lang":"en","type":"review","venue":"Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":131,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Mycobacterium tuberculosis; Protein tyrosine phosphatase; Biology; Kinase; Phosphatase; Signal transduction; Tuberculosis; Cell biology; Microbiology; Phosphorylation; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004365396,0.0009830047,0.001467962,0.000211645,0.0001755752,0.0001833773,0.0003830334,0.001075175,0.000005651369],"category_scores_gemma":[0.0001117227,0.0008390994,0.0003051889,0.0003229827,0.0004451598,0.00002156377,0.0007897833,0.0007229462,0.000003352891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003880184,"about_ca_system_score_gemma":0.0002755056,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006705466,"about_ca_topic_score_gemma":0.000008236753,"domain_scores_codex":[0.9960761,0.0004756673,0.0007432171,0.001690885,0.0002377593,0.0007763702],"domain_scores_gemma":[0.9984241,0.0000336835,0.0003698904,0.0007189068,0.00008360093,0.0003698532],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001880603,0.0001857166,4.571037e-7,0.005034856,0.0001336221,0.00001837199,0.00002600455,5.856726e-8,0.8993005,0.00005843214,0.0000192077,0.0950347],"study_design_scores_gemma":[0.0008378496,0.0008660189,0.00005435163,0.002714955,0.0002456981,0.00007197075,0.00001082057,0.000009061704,0.9530967,0.0002062484,0.04068391,0.001202363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.5073955,0.488935,0.00001247416,0.0001811833,0.00002092319,0.003078787,0.0003431498,0.00001946533,0.00001354182],"genre_scores_gemma":[0.04492903,0.9492295,0.00288343,0.0001993058,0.0002783649,0.001182408,0.00110554,0.0001319395,0.00006042106],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.4624665,"threshold_uncertainty_score":0.999406,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01811049022179143,"score_gpt":0.2809097327630414,"score_spread":0.26279924254125,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}