{"id":"W2072943537","doi":"10.1128/jb.183.19.5725-5732.2001","title":"Complete Nucleotide Sequence of a 43-Kilobase Genomic Island Associated with the Multidrug Resistance Region of<i>Salmonella enterica</i>Serovar Typhimurium DT104 and Its Identification in Phage Type DT120 and Serovar Agona","year":2001,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":403,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"","keywords":"ORFS; Biology; Salmonella enterica; Genomic island; Salmonella; Serotype; Plasmid; Genetics; Multiple drug resistance; Microbiology; Homology (biology); Gene; Nucleic acid sequence; Virology; Open reading frame; Peptide sequence; Bacteria; Drug resistance","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007499373,0.0001503781,0.0005102106,0.00003798943,0.00006376507,0.00001255917,0.0002336259,0.000111681,0.00001608282],"category_scores_gemma":[0.0002046428,0.00006174762,0.00005509986,0.0002642366,0.0002798002,0.0001187653,0.00005672755,0.0001928776,0.000001258892],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003312872,"about_ca_system_score_gemma":0.00001757062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00009109533,"about_ca_topic_score_gemma":0.0007636953,"domain_scores_codex":[0.998312,0.0005155662,0.0006405815,0.0002192217,0.00009653297,0.0002160846],"domain_scores_gemma":[0.9980381,0.0005741406,0.001033698,0.00007674156,0.0002130255,0.00006427571],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007750733,0.00006236439,0.1212809,0.00001433756,0.00004590931,0.00004512078,0.000231886,0.0000136874,0.8769116,0.00003182026,0.0001186453,0.0004686105],"study_design_scores_gemma":[0.0005617352,0.0005830929,0.9957572,0.00009901151,0.00003989194,0.0003494475,0.000228224,0.0001274143,0.0007298849,0.0001634357,0.001243528,0.0001171894],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976149,0.000846085,0.000007431859,0.001211555,0.00009085744,0.000146247,0.00003972992,0.000005000764,0.0000381939],"genre_scores_gemma":[0.9981889,0.00144289,0.00005117467,0.000161253,0.00006470473,0.000001792809,0.00002056132,0.000002365978,0.00006634457],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8761817,"threshold_uncertainty_score":0.2517995,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0384990947416732,"score_gpt":0.2421973662436742,"score_spread":0.203698271502001,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}