{"id":"W2073064178","doi":"10.1371/journal.pone.0067157","title":"Epidemics and Frequent Recombination within Species in Outbreaks of Human Enterovirus B-Associated Hand, Foot and Mouth Disease in Shandong China in 2010 and 2011","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Phylogenetic tree; Outbreak; Virology; Lineage (genetic); Biology; Enterovirus; Serotype; Genome; Foot-and-mouth disease; Mega-; Genotype; Molecular epidemiology; Polymerase chain reaction; Genetics; Gene; Virus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005206909,0.0002448059,0.0002222659,0.001145771,0.0005275928,0.0003525213,0.0002473909,0.0002784931,0.0004072669],"category_scores_gemma":[0.0007520947,0.000242673,0.0002837497,0.0009181726,0.0003917211,0.0002403413,0.0003851753,0.0002005805,0.00003726939],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001022121,"about_ca_system_score_gemma":0.0006685061,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02337841,"about_ca_topic_score_gemma":0.03185847,"domain_scores_codex":[0.9996635,0.00005289966,0.00004059808,0.00008764437,0.00006925958,0.00008609331],"domain_scores_gemma":[0.9994015,0.00007474754,0.0002656128,0.00004689776,0.00009894775,0.0001123929],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001855935,0.00002220955,0.9870711,0.00002077412,0.0000556393,0.0003264417,0.0007897848,0.0001736956,0.007187452,0.00003170679,0.00007870726,0.004056776],"study_design_scores_gemma":[0.000003725424,0.0000238319,0.9991584,0.000002425477,0.000008171259,0.0001631925,0.0001823508,0.0001540102,0.0002097839,0.000008396437,0.0000832708,0.000002494552],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998216,0.00004917073,0.00003067939,0.000005960884,8.453719e-7,0.00000185057,0.00003440775,9.272047e-7,0.00005458918],"genre_scores_gemma":[0.999683,0.00003070002,0.00004732952,0.000007270423,0.000001699923,0.000002982168,0.0001648521,4.064021e-7,0.00006180225],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02337841,"threshold_uncertainty_score":0.04648465,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05881289790359731,"score_gpt":0.2691846274765518,"score_spread":0.2103717295729545,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}