{"id":"W2073066607","doi":"10.1007/s11908-015-0463-z","title":"What Role Does Mycobacterium avium subsp. paratuberculosis Play in Crohn’s Disease?","year":2015,"lang":"en","type":"article","venue":"Current Infectious Disease Reports","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Paratuberculosis; Crohn's disease; Etiology; Mycobacterium avium subsp. paratuberculosis; Mycobacterium; Disease; Immune system; Inflammatory bowel disease; Mycobacterium avium subspecies paratuberculosis; Microbiology; Crohn disease; Biology; Immunology; Bacteria; Medicine; Pathology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006457852,0.0004834984,0.0006404106,0.0004650755,0.0001071755,0.0004139435,0.000115121,0.0001331133,0.0005019283],"category_scores_gemma":[0.001966561,0.000377387,0.0003845316,0.0005910884,0.00009959593,0.001004535,0.0001921198,0.0005261373,0.0002338603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009181445,"about_ca_system_score_gemma":0.001433954,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002067663,"about_ca_topic_score_gemma":0.0001153321,"domain_scores_codex":[0.9957584,0.000204881,0.000837618,0.0009684096,0.001200334,0.001030388],"domain_scores_gemma":[0.9939073,0.0001363739,0.0002952746,0.0011322,0.000497042,0.004031857],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005684447,0.002028939,0.9729344,0.0005006716,0.00008414142,0.008393048,0.0001780703,0.00002022067,0.0001090503,0.00001734397,0.01224615,0.002919523],"study_design_scores_gemma":[0.001333237,0.00009835089,0.9430026,0.0008688738,0.0003442949,0.0001403238,0.00009740778,0.00006340526,0.0002670832,0.001189915,0.05211783,0.0004766886],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9776432,0.0133834,0.000005232772,0.0009467105,0.005420599,0.001298056,0.000067454,0.0002835487,0.000951839],"genre_scores_gemma":[0.9916753,0.005390842,0.000004805091,0.0002486089,0.0009071241,0.0007798891,0.0004696937,0.00006750538,0.0004562137],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03987168,"threshold_uncertainty_score":0.9998678,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02348468918047495,"score_gpt":0.3124671841830781,"score_spread":0.2889824950026031,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}